RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 ZBTB47Q9UFB7 747 aaPredicted RBP7.34□□□□□ -1.23
TRA2B-211ENST00000477939 NIP7Q9Y221 180 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRA2B-211ENST00000477939 SCN4AP35499 1836 aa7.34□□□□□ -1.24
TRA2B-211ENST00000477939 COL4A5P29400 1685 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 HMGB1P1B2RPK0 211 aaPredicted RBP7.33□□□□□ -1.24
TRA2B-211ENST00000477939 LETM1O95202 739 aaPredicted RBP7.33□□□□□ -1.24
TRA2B-211ENST00000477939 POTEIP0CG38 1075 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 POTEJP0CG39 1038 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 NPR1P16066 1061 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 EIF4A1P60842 406 aaKnown RBP7.33□□□□□ -1.24
TRA2B-211ENST00000477939 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 OLFM4Q6UX06 510 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 GTPBP4Q9BZE4 634 aaKnown RBP7.33□□□□□ -1.24
TRA2B-211ENST00000477939 TSPYL1Q9H0U9 437 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 BSDC1Q9NW68 430 aaPredicted RBP7.33□□□□□ -1.24
TRA2B-211ENST00000477939 ANKRD36CQ5JPF3 1778 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 ADAMTSL1Q8N6G6 1762 aa7.33□□□□□ -1.24
TRA2B-211ENST00000477939 UBN2Q6ZU65 1347 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 FAM177BA6PVY3 158 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 DDNO94850 711 aaPredicted RBP7.32□□□□□ -1.24
TRA2B-211ENST00000477939 NFE2L2Q16236 605 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 CRY2Q49AN0 593 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 CCDC93Q567U6 631 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 SOGA3Q5TF21 947 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 DPY19L2Q6NUT2 758 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 TPTE2Q6XPS3 522 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 TTLL7Q6ZT98 887 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 KCTD17Q8N5Z5 321 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 RIC1Q4ADV7 1423 aa7.32□□□□□ -1.24
TRA2B-211ENST00000477939 IBTKQ9P2D0 1353 aaPredicted RBP7.32□□□□□ -1.24
TRA2B-211ENST00000477939 MAP3K15Q6ZN16 1313 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 ZNF541Q9H0D2 1346 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 LAMB2P55268 1798 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 CLCN1P35523 988 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 TERF1P54274 439 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 FKBP4Q02790 459 aaKnown RBP eCLIP7.31□□□□□ -1.24
TRA2B-211ENST00000477939 PPP4R3BQ5MIZ7 849 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 LRP10Q7Z4F1 713 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 SLC51AQ86UW1 340 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 NUTM1Q86Y26 1132 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 EGFL6Q8IUX8 553 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 NGEFQ8N5V2 710 aa7.31□□□□□ -1.24
TRA2B-211ENST00000477939 PNISRQ8TF01 805 aaKnown RBP7.31□□□□□ -1.24
TRA2B-211ENST00000477939 L3MBTL3Q96JM7 780 aaPredicted RBP7.31□□□□□ -1.24
TRA2B-211ENST00000477939 ZNF277Q9NRM2 450 aaPredicted RBP7.31□□□□□ -1.24
TRA2B-211ENST00000477939 MAPK8IP3Q9UPT6 1336 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 LTBP1Q14766 1721 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 ERVV-1B6SEH8 477 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 GOLIM4O00461 696 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 MYL6BP14649 208 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 GPTP24298 496 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 DMTNQ08495 405 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 KIF6Q6ZMV9 814 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 TSHZ1Q6ZSZ6 1077 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 TMTC2Q8N394 836 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 PLCD3Q8N3E9 789 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 OTUD6BQ8N6M0 293 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 IPO9Q96P70 1041 aaKnown RBP7.3□□□□□ -1.24
TRA2B-211ENST00000477939 ZBTB3Q9H5J0 574 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 RAI14Q9P0K7 980 aa7.3□□□□□ -1.24
TRA2B-211ENST00000477939 RRP7AQ9Y3A4 280 aaKnown RBP7.3□□□□□ -1.24
TRA2B-211ENST00000477939 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 NTSR2O95665 410 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 HDAC1Q13547 482 aaPredicted RBP7.29□□□□□ -1.24
TRA2B-211ENST00000477939 PDIA6Q15084 440 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 PROSER3Q2NL68 480 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 COL13A1Q5TAT6 717 aaPredicted RBP7.29□□□□□ -1.24
TRA2B-211ENST00000477939 SUSD4Q5VX71 490 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 CHADLQ6NUI6 762 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 C3orf67Q6ZVT6 689 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 DDRGK1Q96HY6 314 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 NYXQ9GZU5 481 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 TAF1DQ9H5J8 278 aaPredicted RBP7.29□□□□□ -1.24
TRA2B-211ENST00000477939 TSPYL4Q9UJ04 414 aa7.29□□□□□ -1.24
TRA2B-211ENST00000477939 PASKQ96RG2 1323 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 IQCA1LA6NCM1 817 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 FZD9O00144 591 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 ANXA1P04083 346 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 HSPA1AP0DMV8 641 aaKnown RBP7.28□□□□□ -1.24
TRA2B-211ENST00000477939 HSPA1BP0DMV9 641 aaKnown RBP7.28□□□□□ -1.24
TRA2B-211ENST00000477939 ALDH1B1P30837 517 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 IARSP41252 1262 aaKnown RBP7.28□□□□□ -1.24
TRA2B-211ENST00000477939 RBM25P49756 843 aaKnown RBP7.28□□□□□ -1.24
TRA2B-211ENST00000477939 L1TD1Q5T7N2 865 aaKnown RBP7.28□□□□□ -1.24
TRA2B-211ENST00000477939 GIGYF2Q6Y7W6 1299 aaKnown RBP7.28□□□□□ -1.24
TRA2B-211ENST00000477939 LDHDQ86WU2 507 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 ZNF34Q8IZ26 560 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 RTKN2Q8IZC4 609 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 MIER1Q8N108 512 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 CREBZFQ9NS37 354 aa7.28□□□□□ -1.24
TRA2B-211ENST00000477939 RNF123Q5XPI4 1314 aa7.27□□□□□ -1.24
TRA2B-211ENST00000477939 LRRC37AA6NMS7 1700 aa7.27□□□□□ -1.25
TRA2B-211ENST00000477939 DDX60Q8IY21 1712 aaKnown RBP7.27□□□□□ -1.25
TRA2B-211ENST00000477939 ANP32CO43423 234 aa7.27□□□□□ -1.25
TRA2B-211ENST00000477939 HOXA10P31260 410 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-211ENST00000477939 TMPOP42166 694 aaKnown RBP7.27□□□□□ -1.25
TRA2B-211ENST00000477939 RIPK4P57078 832 aa7.27□□□□□ -1.25
TRA2B-211ENST00000477939 KRT24Q2M2I5 525 aa7.27□□□□□ -1.25
TRA2B-211ENST00000477939 SYNE4Q8N205 404 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms