RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	JARID2	Q92833	1246 aa	Predicted RBP	13.28	□□□□□ -0.28
RPS18-231	ENST00000472218	ERC2	O15083	957 aa		13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	GYS1	P13807	737 aa		13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	NLGN1	Q8N2Q7	840 aa		13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	TFCP2L1	Q9NZI6	479 aa		13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	SRP68	Q9UHB9	627 aa	Known RBP	13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	PA2G4	Q9UQ80	394 aa	Known RBP	13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	CHMP3	Q9Y3E7	222 aa		13.27	□□□□□ -0.29
RPS18-231	ENST00000472218	SMARCA5	O60264	1052 aa	Predicted RBP	13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	SASH1	O94885	1247 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	IFIT2	P09913	472 aa	Known RBP	13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	ITGA6	P23229	1130 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	GTF2E1	P29083	439 aa	Predicted RBP	13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	TAF7L	Q5H9L4	462 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	RTL5	Q5HYW3	569 aa	Predicted RBP	13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	TTC22	Q5TAA0	569 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	AMIGO3	Q86WK7	504 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	SKAP1	Q86WV1	359 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	TICAM2	Q86XR7	235 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	AKAP2	Q9Y2D5	859 aa		13.26	□□□□□ -0.29
RPS18-231	ENST00000472218	APBB1	O00213	710 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	GLRX3	O76003	335 aa	Known RBP	13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	PHF14	O94880	888 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	TM4SF1	P30408	202 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	NFIX	Q14938	502 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	C8orf34	Q49A92	452 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	ATG9A	Q7Z3C6	839 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	CDC5L	Q99459	802 aa	Known RBP	13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	TSHZ2	Q9NRE2	1034 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	CEP126	Q9P2H0	1117 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	UBR3	Q6ZT12	1888 aa		13.25	□□□□□ -0.29
RPS18-231	ENST00000472218	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.24	□□□□□ -0.29
RPS18-231	ENST00000472218	NLRP3	Q96P20	1036 aa		13.24	□□□□□ -0.29
RPS18-231	ENST00000472218	GREM2	Q9H772	168 aa		13.24	□□□□□ -0.29
RPS18-231	ENST00000472218	ECHDC1	Q9NTX5	307 aa		13.24	□□□□□ -0.29
RPS18-231	ENST00000472218	STK32B	Q9NY57	414 aa		13.24	□□□□□ -0.29
RPS18-231	ENST00000472218	MROH5	Q6ZUA9	1318 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	COL24A1	Q17RW2	1714 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	HCLS1	P14317	486 aa	Predicted RBP	13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	SLC15A2	Q16348	729 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	ZNF827	Q17R98	1081 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	ERFE	Q4G0M1	354 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	TNNI3K	Q59H18	835 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	LDHAL6A	Q6ZMR3	332 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	AACS	Q86V21	672 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	SYNE4	Q8N205	404 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	SIL1	Q9H173	461 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	IL1RAPL2	Q9NP60	686 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	RIPOR2	Q9Y4F9	1068 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	FPGT-TNNI3K	V9GXZ4	949 aa		13.23	□□□□□ -0.29
RPS18-231	ENST00000472218	SOCS7	O14512	581 aa		13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	IGHMBP2	P38935	993 aa	Known RBP	13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	EN1	Q05925	392 aa	Predicted RBP	13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	CASC1	Q6TDU7	716 aa		13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	BICDL1	Q6ZP65	573 aa		13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	DEFB132	Q7Z7B7	95 aa		13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	CNBD1	Q8NA66	436 aa		13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	KLHDC4	Q8TBB5	520 aa		13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	EAF2	Q96CJ1	260 aa	Predicted RBP	13.22	□□□□□ -0.29
RPS18-231	ENST00000472218	ABCC12	Q96J65	1359 aa		13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	CDC45	O75419	566 aa		13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	GSPT1	P15170	499 aa	Known RBP	13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	ST5	P78524	1137 aa		13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	TFCP2	Q12800	502 aa		13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	EZH2	Q15910	746 aa	Known RBP	13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	COL23A1	Q86Y22	540 aa	Predicted RBP	13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	NUTM1	Q86Y26	1132 aa		13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	PI4K2B	Q8TCG2	481 aa		13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	MPHOSPH8	Q99549	860 aa		13.21	□□□□□ -0.29
RPS18-231	ENST00000472218	C4A	P0C0L4	1744 aa		13.21	□□□□□ -0.3
RPS18-231	ENST00000472218	LAMB2	P55268	1798 aa		13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	PNPLA7	Q6ZV29	1317 aa		13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	KLRG2	A4D1S0	409 aa	Predicted RBP	13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	SERPINB2	P05120	415 aa		13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	ATP5J	P18859	108 aa		13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	SLC16A10	Q8TF71	515 aa		13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	UPF2	Q9HAU5	1272 aa	Known RBP	13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	CNNM1	Q9NRU3	951 aa		13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	BSDC1	Q9NW68	430 aa	Predicted RBP	13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	LRP5	O75197	1615 aa		13.2	□□□□□ -0.3
RPS18-231	ENST00000472218	FAM177B	A6PVY3	158 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	POLRMT	O00411	1230 aa	Known RBP	13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	ZBTB22	O15209	634 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	NPHP1	O15259	732 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	CRY2	Q49AN0	593 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	LRRC24	Q50LG9	513 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	METTL24	Q5JXM2	366 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	PRR5L	Q6MZQ0	368 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	SMIM5	Q71RC9	77 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	ANKRD18A	Q8IVF6	992 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	CNTROB	Q8N137	903 aa		13.19	□□□□□ -0.3
RPS18-231	ENST00000472218	MYH3	P11055	1940 aa		13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	EPB41L2	O43491	1005 aa	Known RBP	13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	PDE8B	O95263	885 aa		13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	SDS	P20132	328 aa		13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	PUM3	Q15397	648 aa	Known RBP	13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	DDX46	Q7L014	1031 aa	Known RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms