RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 UGGT2Q9NYU1 1516 aa10.85□□□□□ -0.67
SCN9A-206ENST00000472119 RGS9O75916 674 aaPredicted RBP10.84□□□□□ -0.67
SCN9A-206ENST00000472119 ABL2P42684 1182 aa10.84□□□□□ -0.67
SCN9A-206ENST00000472119 ZNF280CQ8ND82 737 aa10.84□□□□□ -0.67
SCN9A-206ENST00000472119 HCN4Q9Y3Q4 1203 aa10.84□□□□□ -0.67
SCN9A-206ENST00000472119 CTTNBP2Q8WZ74 1663 aa10.84□□□□□ -0.67
SCN9A-206ENST00000472119 DISP1Q96F81 1524 aa10.84□□□□□ -0.67
SCN9A-206ENST00000472119 YBX3P16989 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCN9A-206ENST00000472119 NOS3P29474 1203 aa10.83□□□□□ -0.68
SCN9A-206ENST00000472119 SSTR4P31391 388 aa10.83□□□□□ -0.68
SCN9A-206ENST00000472119 DNAJB12Q9NXW2 375 aaKnown RBP10.83□□□□□ -0.68
SCN9A-206ENST00000472119 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
SCN9A-206ENST00000472119 PTPRGP23470 1445 aa10.83□□□□□ -0.68
SCN9A-206ENST00000472119 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
SCN9A-206ENST00000472119 C1orf53Q5VUE5 145 aa10.82□□□□□ -0.68
SCN9A-206ENST00000472119 PHACTR1Q9C0D0 580 aa10.82□□□□□ -0.68
SCN9A-206ENST00000472119 GDPD2Q9HCC8 539 aa10.82□□□□□ -0.68
SCN9A-206ENST00000472119 SKIP12755 728 aa10.81□□□□□ -0.68
SCN9A-206ENST00000472119 WASHC4Q2M389 1173 aa10.81□□□□□ -0.68
SCN9A-206ENST00000472119 PRR23CQ6ZRP0 262 aa10.81□□□□□ -0.68
SCN9A-206ENST00000472119 MEGF10Q96KG7 1140 aa10.81□□□□□ -0.68
SCN9A-206ENST00000472119 SUSD3Q96L08 255 aa10.81□□□□□ -0.68
SCN9A-206ENST00000472119 CHMP3Q9Y3E7 222 aa10.81□□□□□ -0.68
SCN9A-206ENST00000472119 IRAK1P51617 712 aa10.8□□□□□ -0.68
SCN9A-206ENST00000472119 MSL1Q68DK7 614 aa10.8□□□□□ -0.68
SCN9A-206ENST00000472119 SOX11P35716 441 aa10.79□□□□□ -0.68
SCN9A-206ENST00000472119 PSMA6P60900 246 aaKnown RBP10.79□□□□□ -0.68
SCN9A-206ENST00000472119 FBXO11Q86XK2 927 aa10.79□□□□□ -0.68
SCN9A-206ENST00000472119 FMNL2Q96PY5 1086 aa10.79□□□□□ -0.68
SCN9A-206ENST00000472119 KIAA0556O60303 1618 aa10.79□□□□□ -0.68
SCN9A-206ENST00000472119 ILDR2Q71H61 639 aa10.78□□□□□ -0.68
SCN9A-206ENST00000472119 DTWD1Q8N5C7 304 aa10.78□□□□□ -0.68
SCN9A-206ENST00000472119 PNMA5Q96PV4 448 aa10.78□□□□□ -0.68
SCN9A-206ENST00000472119 NCOA4Q13772 614 aa10.77□□□□□ -0.69
SCN9A-206ENST00000472119 TSPAN10Q9H1Z9 355 aaPredicted RBP10.77□□□□□ -0.69
SCN9A-206ENST00000472119 FHOD3Q2V2M9 1422 aa10.76□□□□□ -0.69
SCN9A-206ENST00000472119 FSTP19883 344 aa10.76□□□□□ -0.69
SCN9A-206ENST00000472119 FAM35AQ86V20 835 aa10.76□□□□□ -0.69
SCN9A-206ENST00000472119 BTLAQ7Z6A9 289 aa10.75□□□□□ -0.69
SCN9A-206ENST00000472119 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.75□□□□□ -0.69
SCN9A-206ENST00000472119 SAMD9Q5K651 1589 aa10.74□□□□□ -0.69
SCN9A-206ENST00000472119 LZTS3O60299 673 aaPredicted RBP10.74□□□□□ -0.69
SCN9A-206ENST00000472119 CPB1P15086 417 aa10.74□□□□□ -0.69
SCN9A-206ENST00000472119 NFKB1P19838 968 aa10.74□□□□□ -0.69
SCN9A-206ENST00000472119 HIRAP54198 1017 aaPredicted RBP10.74□□□□□ -0.69
SCN9A-206ENST00000472119 IGF2-ASQ6U949 168 aa10.74□□□□□ -0.69
SCN9A-206ENST00000472119 EFCC1Q9HA90 598 aa10.74□□□□□ -0.69
SCN9A-206ENST00000472119 UACAQ9BZF9 1416 aa10.74□□□□□ -0.69
SCN9A-206ENST00000472119 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
SCN9A-206ENST00000472119 ARID3CA6NKF2 412 aa10.73□□□□□ -0.69
SCN9A-206ENST00000472119 WFDC8Q8IUA0 241 aa10.73□□□□□ -0.69
SCN9A-206ENST00000472119 DEPDC4Q8N2C3 294 aa10.73□□□□□ -0.69
SCN9A-206ENST00000472119 TPCN2Q8NHX9 752 aa10.73□□□□□ -0.69
SCN9A-206ENST00000472119 GSX2Q9BZM3 304 aa10.73□□□□□ -0.69
SCN9A-206ENST00000472119 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
SCN9A-206ENST00000472119 TAL1P17542 331 aaPredicted RBP10.72□□□□□ -0.69
SCN9A-206ENST00000472119 CD97P48960 835 aa10.72□□□□□ -0.69
SCN9A-206ENST00000472119 LCE1DQ5T752 114 aa10.72□□□□□ -0.69
SCN9A-206ENST00000472119 KRTAP4-7Q9BYR0 210 aa10.72□□□□□ -0.69
SCN9A-206ENST00000472119 CLIP1P30622 1438 aa10.72□□□□□ -0.69
SCN9A-206ENST00000472119 EFCAB5A4FU69 1503 aa10.71□□□□□ -0.69
SCN9A-206ENST00000472119 ADCY10Q96PN6 1610 aa10.7□□□□□ -0.7
SCN9A-206ENST00000472119 CCINQ13939 588 aa10.7□□□□□ -0.7
SCN9A-206ENST00000472119 GRIK5Q16478 980 aa10.7□□□□□ -0.7
SCN9A-206ENST00000472119 SLC51AQ86UW1 340 aa10.7□□□□□ -0.7
SCN9A-206ENST00000472119 LPIN3Q9BQK8 851 aa10.7□□□□□ -0.7
SCN9A-206ENST00000472119 RNF114Q9Y508 228 aa10.7□□□□□ -0.7
SCN9A-206ENST00000472119 UHRF1BP1LA0JNW5 1464 aa10.69□□□□□ -0.7
SCN9A-206ENST00000472119 CEP162Q5TB80 1403 aa10.69□□□□□ -0.7
SCN9A-206ENST00000472119 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
SCN9A-206ENST00000472119 PLAURQ03405 335 aa10.69□□□□□ -0.7
SCN9A-206ENST00000472119 AKTIPQ9H8T0 292 aa10.69□□□□□ -0.7
SCN9A-206ENST00000472119 OAS3Q9Y6K5 1087 aaKnown RBP10.69□□□□□ -0.7
SCN9A-206ENST00000472119 ABCC2Q92887 1545 aa10.68□□□□□ -0.7
SCN9A-206ENST00000472119 PPP1R12BO60237 982 aaPredicted RBP10.68□□□□□ -0.7
SCN9A-206ENST00000472119 HIF1AQ16665 826 aa10.68□□□□□ -0.7
SCN9A-206ENST00000472119 PERM1Q5SV97 790 aa10.68□□□□□ -0.7
SCN9A-206ENST00000472119 ELMSAN1Q6PJG2 1045 aa10.68□□□□□ -0.7
SCN9A-206ENST00000472119 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
SCN9A-206ENST00000472119 ALDH16A1Q8IZ83 802 aa10.68□□□□□ -0.7
SCN9A-206ENST00000472119 KIAA1024Q9UPX6 916 aa10.68□□□□□ -0.7
SCN9A-206ENST00000472119 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
SCN9A-206ENST00000472119 ALX3O95076 343 aa10.67□□□□□ -0.7
SCN9A-206ENST00000472119 PCSK7Q16549 785 aa10.67□□□□□ -0.7
SCN9A-206ENST00000472119 CCDC102BQ68D86 513 aa10.67□□□□□ -0.7
SCN9A-206ENST00000472119 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
SCN9A-206ENST00000472119 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
SCN9A-206ENST00000472119 FRRS1LQ9P0K9 344 aa10.67□□□□□ -0.7
SCN9A-206ENST00000472119 ABCA8O94911 1581 aa10.67□□□□□ -0.7
SCN9A-206ENST00000472119 PTCD1O75127 700 aaKnown RBP10.66□□□□□ -0.7
SCN9A-206ENST00000472119 DEAF1O75398 565 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-206ENST00000472119 GP2P55259 537 aaKnown RBP10.66□□□□□ -0.7
SCN9A-206ENST00000472119 NFATC2IPQ8NCF5 419 aa10.66□□□□□ -0.7
SCN9A-206ENST00000472119 NGLY1Q96IV0 654 aa10.66□□□□□ -0.7
SCN9A-206ENST00000472119 FMN1Q68DA7 1419 aa10.66□□□□□ -0.7
SCN9A-206ENST00000472119 MLLT1Q03111 559 aaPredicted RBP10.65□□□□□ -0.7
SCN9A-206ENST00000472119 KDM5BQ9UGL1 1544 aa10.64□□□□□ -0.71
SCN9A-206ENST00000472119 MED26O95402 600 aa10.64□□□□□ -0.71
SCN9A-206ENST00000472119 FZD5Q13467 585 aa10.64□□□□□ -0.71
SCN9A-206ENST00000472119 ATP10BO94823 1461 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms