RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 DLK2Q6UY11 383 aa13.83□□□□□ -0.2
CDHR3-209ENST00000472116 DPP8Q6V1X1 898 aaPredicted RBP13.83□□□□□ -0.2
CDHR3-209ENST00000472116 RASAL3Q86YV0 1011 aa13.83□□□□□ -0.2
CDHR3-209ENST00000472116 COLQQ9Y215 455 aaPredicted RBP13.83□□□□□ -0.2
CDHR3-209ENST00000472116 MKI67P46013 3256 aaKnown RBP13.82□□□□□ -0.2
CDHR3-209ENST00000472116 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
CDHR3-209ENST00000472116 FKTNO75072 461 aa13.82□□□□□ -0.2
CDHR3-209ENST00000472116 TBC1D10BQ4KMP7 808 aaPredicted RBP13.82□□□□□ -0.2
CDHR3-209ENST00000472116 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
CDHR3-209ENST00000472116 SAMD7Q7Z3H4 446 aa13.82□□□□□ -0.2
CDHR3-209ENST00000472116 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
CDHR3-209ENST00000472116 USP16Q9Y5T5 823 aa13.82□□□□□ -0.2
CDHR3-209ENST00000472116 CUL9Q8IWT3 2517 aa13.82□□□□□ -0.2
CDHR3-209ENST00000472116 SNRPA1P09661 255 aaKnown RBP13.81□□□□□ -0.2
CDHR3-209ENST00000472116 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
CDHR3-209ENST00000472116 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
CDHR3-209ENST00000472116 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
CDHR3-209ENST00000472116 DPF2Q92785 391 aa13.81□□□□□ -0.2
CDHR3-209ENST00000472116 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
CDHR3-209ENST00000472116 POTEFA5A3E0 1075 aa13.8□□□□□ -0.2
CDHR3-209ENST00000472116 FKBP1BP68106 108 aa13.8□□□□□ -0.2
CDHR3-209ENST00000472116 MPNDQ8N594 471 aa13.8□□□□□ -0.2
CDHR3-209ENST00000472116 RTFDC1Q9BY42 306 aaPredicted RBP13.8□□□□□ -0.2
CDHR3-209ENST00000472116 DDX60Q8IY21 1712 aaKnown RBP13.8□□□□□ -0.2
CDHR3-209ENST00000472116 PRAMEF22A3QJZ6 481 aa13.79□□□□□ -0.2
CDHR3-209ENST00000472116 HLFQ16534 295 aa13.79□□□□□ -0.2
CDHR3-209ENST00000472116 IL17REQ8NFR9 667 aa13.79□□□□□ -0.2
CDHR3-209ENST00000472116 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
CDHR3-209ENST00000472116 IBTKQ9P2D0 1353 aaPredicted RBP13.79□□□□□ -0.2
CDHR3-209ENST00000472116 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
CDHR3-209ENST00000472116 SREBF2Q12772 1141 aa13.78□□□□□ -0.2
CDHR3-209ENST00000472116 CDCA5Q96FF9 252 aa13.78□□□□□ -0.2
CDHR3-209ENST00000472116 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
CDHR3-209ENST00000472116 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
CDHR3-209ENST00000472116 TRIM17Q9Y577 477 aa13.78□□□□□ -0.2
CDHR3-209ENST00000472116 RPS12P25398 132 aaKnown RBP13.77□□□□□ -0.21
CDHR3-209ENST00000472116 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
CDHR3-209ENST00000472116 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
CDHR3-209ENST00000472116 KIF6Q6ZMV9 814 aa13.77□□□□□ -0.21
CDHR3-209ENST00000472116 PANK3Q9H999 370 aa13.77□□□□□ -0.21
CDHR3-209ENST00000472116 GGA3Q9NZ52 723 aa13.77□□□□□ -0.21
CDHR3-209ENST00000472116 KCNQ3O43525 872 aa13.76□□□□□ -0.21
CDHR3-209ENST00000472116 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
CDHR3-209ENST00000472116 GPTP24298 496 aa13.76□□□□□ -0.21
CDHR3-209ENST00000472116 SLC51AQ86UW1 340 aa13.76□□□□□ -0.21
CDHR3-209ENST00000472116 ANKRD36CQ5JPF3 1778 aa13.76□□□□□ -0.21
CDHR3-209ENST00000472116 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 ERVV-1B6SEH8 477 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 PSMD14O00487 310 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 BBOX1O75936 387 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 TM4SF4P48230 202 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
CDHR3-209ENST00000472116 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
CDHR3-209ENST00000472116 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 SP8Q8IXZ3 490 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 LAMB2P55268 1798 aa13.75□□□□□ -0.21
CDHR3-209ENST00000472116 ABCC4O15439 1325 aa13.74□□□□□ -0.21
CDHR3-209ENST00000472116 YDJCA8MPS7 323 aa13.74□□□□□ -0.21
CDHR3-209ENST00000472116 ALDH1A1P00352 501 aa13.74□□□□□ -0.21
CDHR3-209ENST00000472116 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
CDHR3-209ENST00000472116 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
CDHR3-209ENST00000472116 EGFRP00533 1210 aa13.73□□□□□ -0.21
CDHR3-209ENST00000472116 EN2P19622 333 aaPredicted RBP13.73□□□□□ -0.21
CDHR3-209ENST00000472116 TCIRG1Q13488 830 aa13.73□□□□□ -0.21
CDHR3-209ENST00000472116 KNSTRNQ9Y448 316 aa13.73□□□□□ -0.21
CDHR3-209ENST00000472116 CEMIPQ8WUJ3 1361 aa13.72□□□□□ -0.21
CDHR3-209ENST00000472116 TAF1P21675 1872 aa13.72□□□□□ -0.21
CDHR3-209ENST00000472116 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
CDHR3-209ENST00000472116 MKRN3Q13064 507 aaKnown RBP13.72□□□□□ -0.21
CDHR3-209ENST00000472116 WASHC4Q2M389 1173 aa13.72□□□□□ -0.21
CDHR3-209ENST00000472116 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
CDHR3-209ENST00000472116 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
CDHR3-209ENST00000472116 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
CDHR3-209ENST00000472116 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
CDHR3-209ENST00000472116 H0YGN5 161 aa13.71□□□□□ -0.21
CDHR3-209ENST00000472116 NF2P35240 595 aa13.71□□□□□ -0.21
CDHR3-209ENST00000472116 ANGEL2Q5VTE6 544 aaKnown RBP13.71□□□□□ -0.21
CDHR3-209ENST00000472116 DDX46Q7L014 1031 aaKnown RBP13.71□□□□□ -0.21
CDHR3-209ENST00000472116 OTOP1Q7RTM1 612 aa13.71□□□□□ -0.21
CDHR3-209ENST00000472116 ERO1AQ96HE7 468 aa13.71□□□□□ -0.21
CDHR3-209ENST00000472116 SZT2Q5T011 3432 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 UBN2Q6ZU65 1347 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
CDHR3-209ENST00000472116 NTSR2O95665 410 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 PARP10Q53GL7 1025 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 RTF1Q92541 710 aaKnown RBP13.7□□□□□ -0.22
CDHR3-209ENST00000472116 CENPFP49454 3210 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 LRRC37AA6NMS7 1700 aa13.7□□□□□ -0.22
CDHR3-209ENST00000472116 G3V3G9 751 aa13.69□□□□□ -0.22
CDHR3-209ENST00000472116 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
CDHR3-209ENST00000472116 DCAF8Q5TAQ9 597 aa13.69□□□□□ -0.22
CDHR3-209ENST00000472116 ARMC5Q96C12 935 aa13.69□□□□□ -0.22
CDHR3-209ENST00000472116 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
CDHR3-209ENST00000472116 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
CDHR3-209ENST00000472116 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
CDHR3-209ENST00000472116 DUOX1Q9NRD9 1551 aa13.68□□□□□ -0.22
CDHR3-209ENST00000472116 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms