RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SLC51AQ86UW1 340 aa9.37□□□□□ -0.91
HDAC3-206ENST00000471968 NBPF5PQ86XG9 351 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-206ENST00000471968 SULF1Q8IWU6 871 aa9.37□□□□□ -0.91
HDAC3-206ENST00000471968 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
HDAC3-206ENST00000471968 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-206ENST00000471968 CDH23Q9H251 3354 aa9.37□□□□□ -0.91
HDAC3-206ENST00000471968 UBE2Q2LH0YL09 131 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 BMP8BP34820 402 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 EIF5P55010 431 aaKnown RBP9.36□□□□□ -0.91
HDAC3-206ENST00000471968 FKBP1BP68106 108 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 CAP1Q01518 475 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
HDAC3-206ENST00000471968 SH3TC2Q8TF17 1288 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 EYA1Q99502 592 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 GDF15Q99988 308 aa9.36□□□□□ -0.91
HDAC3-206ENST00000471968 ST20-MTHFSA0A0A6YYL1 179 aa9.35□□□□□ -0.91
HDAC3-206ENST00000471968 BDP1A6H8Y1 2624 aa9.35□□□□□ -0.91
HDAC3-206ENST00000471968 ECM2O94769 699 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-206ENST00000471968 MTHFSP49914 203 aa9.35□□□□□ -0.91
HDAC3-206ENST00000471968 TNIP1Q15025 636 aa9.35□□□□□ -0.91
HDAC3-206ENST00000471968 UBE2Q1Q7Z7E8 422 aa9.35□□□□□ -0.91
HDAC3-206ENST00000471968 SCN7AQ01118 1682 aa9.35□□□□□ -0.91
HDAC3-206ENST00000471968 TCERG1O14776 1098 aaKnown RBP9.34□□□□□ -0.91
HDAC3-206ENST00000471968 TDHQ8IZJ6 230 aa9.34□□□□□ -0.91
HDAC3-206ENST00000471968 P2RX7Q99572 595 aaKnown RBP9.34□□□□□ -0.91
HDAC3-206ENST00000471968 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
HDAC3-206ENST00000471968 GGA3Q9NZ52 723 aa9.34□□□□□ -0.91
HDAC3-206ENST00000471968 PRAMEF22A3QJZ6 481 aa9.33□□□□□ -0.92
HDAC3-206ENST00000471968 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
HDAC3-206ENST00000471968 ZNF530Q6P9A1 599 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-206ENST00000471968 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
HDAC3-206ENST00000471968 MUC6Q6W4X9 2439 aa9.33□□□□□ -0.92
HDAC3-206ENST00000471968 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-206ENST00000471968 POTEB2H3BUK9 544 aa9.32□□□□□ -0.92
HDAC3-206ENST00000471968 PPM1GO15355 546 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-206ENST00000471968 SP3Q02447 781 aa9.32□□□□□ -0.92
HDAC3-206ENST00000471968 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-206ENST00000471968 MTFR1Q15390 333 aa9.32□□□□□ -0.92
HDAC3-206ENST00000471968 IFNL1Q8IU54 200 aa9.32□□□□□ -0.92
HDAC3-206ENST00000471968 NKX2-3Q8TAU0 364 aa9.32□□□□□ -0.92
HDAC3-206ENST00000471968 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
HDAC3-206ENST00000471968 KIF24Q5T7B8 1368 aa9.32□□□□□ -0.92
HDAC3-206ENST00000471968 CACNA1GO43497 2377 aa9.31□□□□□ -0.92
HDAC3-206ENST00000471968 FAM177BA6PVY3 158 aa9.31□□□□□ -0.92
HDAC3-206ENST00000471968 CAMTA2O94983 1202 aa9.31□□□□□ -0.92
HDAC3-206ENST00000471968 SLC39A6Q13433 755 aa9.31□□□□□ -0.92
HDAC3-206ENST00000471968 FAM109BQ6ICB4 259 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-206ENST00000471968 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
HDAC3-206ENST00000471968 CNKSR2Q8WXI2 1034 aa9.31□□□□□ -0.92
HDAC3-206ENST00000471968 CDX2Q99626 313 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-206ENST00000471968 FARP2O94887 1054 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-206ENST00000471968 CRHR2Q13324 411 aa9.3□□□□□ -0.92
HDAC3-206ENST00000471968 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
HDAC3-206ENST00000471968 KIF4BQ2VIQ3 1234 aa9.3□□□□□ -0.92
HDAC3-206ENST00000471968 PLEKHO1Q53GL0 409 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-206ENST00000471968 TPTE2Q6XPS3 522 aa9.3□□□□□ -0.92
HDAC3-206ENST00000471968 DPF2Q92785 391 aa9.3□□□□□ -0.92
HDAC3-206ENST00000471968 C1QTNF1Q9BXJ1 281 aa9.3□□□□□ -0.92
HDAC3-206ENST00000471968 VPS33BQ9H267 617 aa9.3□□□□□ -0.92
HDAC3-206ENST00000471968 ZMYND8Q9ULU4 1186 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-206ENST00000471968 IGF2BP3O00425 579 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC3-206ENST00000471968 STARD3NLO95772 234 aa9.29□□□□□ -0.92
HDAC3-206ENST00000471968 GJA8P48165 433 aa9.29□□□□□ -0.92
HDAC3-206ENST00000471968 MRE11P49959 708 aa9.29□□□□□ -0.92
HDAC3-206ENST00000471968 C1orf141Q5JVX7 400 aa9.29□□□□□ -0.92
HDAC3-206ENST00000471968 ZNF697Q5TEC3 545 aa9.29□□□□□ -0.92
HDAC3-206ENST00000471968 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
HDAC3-206ENST00000471968 NCOR1O75376 2440 aa9.29□□□□□ -0.92
HDAC3-206ENST00000471968 KDM3BQ7LBC6 1761 aa9.28□□□□□ -0.92
HDAC3-206ENST00000471968 YDJCA8MPS7 323 aa9.28□□□□□ -0.92
HDAC3-206ENST00000471968 FYB1O15117 783 aa9.28□□□□□ -0.92
HDAC3-206ENST00000471968 ARHGEF6Q15052 776 aa9.28□□□□□ -0.92
HDAC3-206ENST00000471968 ANGEL2Q5VTE6 544 aaKnown RBP9.28□□□□□ -0.92
HDAC3-206ENST00000471968 PRAMEF18Q5VWM3 479 aa9.28□□□□□ -0.92
HDAC3-206ENST00000471968 SPRYD7Q5W111 196 aa9.28□□□□□ -0.92
HDAC3-206ENST00000471968 UBE2OQ9C0C9 1292 aaKnown RBP9.28□□□□□ -0.92
HDAC3-206ENST00000471968 SCAF8Q9UPN6 1271 aaKnown RBP9.28□□□□□ -0.92
HDAC3-206ENST00000471968 MANSC4A6NHS7 340 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-206ENST00000471968 PSMD14O00487 310 aa9.27□□□□□ -0.93
HDAC3-206ENST00000471968 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-206ENST00000471968 MAGEA10P43363 369 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-206ENST00000471968 INHBEP58166 350 aa9.27□□□□□ -0.93
HDAC3-206ENST00000471968 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
HDAC3-206ENST00000471968 VSIG10Q8N0Z9 540 aa9.27□□□□□ -0.93
HDAC3-206ENST00000471968 SUPT20HQ8NEM7 779 aa9.27□□□□□ -0.93
HDAC3-206ENST00000471968 MYLIPQ8WY64 445 aa9.27□□□□□ -0.93
HDAC3-206ENST00000471968 RPGRQ92834 1020 aaKnown RBP9.27□□□□□ -0.93
HDAC3-206ENST00000471968 TMX4Q9H1E5 349 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-206ENST00000471968 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-206ENST00000471968 RAB3GAP2Q9H2M9 1393 aa9.26□□□□□ -0.93
HDAC3-206ENST00000471968 GJB1P08034 283 aa9.26□□□□□ -0.93
HDAC3-206ENST00000471968 SYN1P17600 705 aa9.26□□□□□ -0.93
HDAC3-206ENST00000471968 IL6STP40189 918 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-206ENST00000471968 PTPN12Q05209 780 aaKnown RBP9.26□□□□□ -0.93
HDAC3-206ENST00000471968 KIAA2012Q0VF49 1180 aa9.26□□□□□ -0.93
HDAC3-206ENST00000471968 DZIP3Q86Y13 1208 aaKnown RBP9.26□□□□□ -0.93
HDAC3-206ENST00000471968 C7orf61Q8IZ16 206 aa9.26□□□□□ -0.93
HDAC3-206ENST00000471968 ADAMTS19Q8TE59 1207 aa9.26□□□□□ -0.93
HDAC3-206ENST00000471968 LRFN3Q9BTN0 628 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms