RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 KDM4CQ9H3R0 1056 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 SLC27A5Q9Y2P5 690 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 PCDH11XQ9BZA7 1347 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 PCDH11YQ9BZA8 1340 aa7.22□□□□□ -1.25
HDAC8-216ENST00000470998 SRCAPQ6ZRS2 3230 aa7.21□□□□□ -1.26
HDAC8-216ENST00000470998 ANP32AP39687 249 aaKnown RBP7.21□□□□□ -1.26
HDAC8-216ENST00000470998 NFE2L2Q16236 605 aa7.21□□□□□ -1.26
HDAC8-216ENST00000470998 HSP90AB2PQ58FF8 381 aa7.21□□□□□ -1.26
HDAC8-216ENST00000470998 NKX2-3Q8TAU0 364 aa7.21□□□□□ -1.26
HDAC8-216ENST00000470998 SPIRE2Q8WWL2 714 aa7.21□□□□□ -1.26
HDAC8-216ENST00000470998 DDRGK1Q96HY6 314 aa7.21□□□□□ -1.26
HDAC8-216ENST00000470998 MEGF6O75095 1541 aa7.21□□□□□ -1.26
HDAC8-216ENST00000470998 IPO8O15397 1037 aaKnown RBP7.2□□□□□ -1.26
HDAC8-216ENST00000470998 ZBTB7AO95365 584 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 FDX1P10109 184 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 IL13P35225 146 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 GNAI1P63096 354 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 CLUAP1Q96AJ1 413 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 SYTL4Q96C24 671 aaPredicted RBP7.2□□□□□ -1.26
HDAC8-216ENST00000470998 TBC1D2Q9BYX2 928 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 SLC6A16Q9GZN6 736 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 LRRC4BQ9NT99 713 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 IFT57Q9NWB7 429 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 MAP3K5Q99683 1374 aa7.2□□□□□ -1.26
HDAC8-216ENST00000470998 NCAPD2Q15021 1401 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 CASZ1Q86V15 1759 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 C6orf229H3BNL8 230 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 PRKCSHP14314 528 aaPredicted RBP7.19□□□□□ -1.26
HDAC8-216ENST00000470998 POLD1P28340 1107 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 RIPK4P57078 832 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 ZNF827Q17R98 1081 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 ZKSCAN2Q63HK3 967 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 FLAD1Q8NFF5 587 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 SMARCC1Q92922 1105 aaPredicted RBP7.19□□□□□ -1.26
HDAC8-216ENST00000470998 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.19□□□□□ -1.26
HDAC8-216ENST00000470998 EMILIN1Q9Y6C2 1016 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 PAPPAQ13219 1627 aa7.19□□□□□ -1.26
HDAC8-216ENST00000470998 MOXD2PA6NHM9 499 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 PLIN1O60240 522 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 S1PR4O95977 384 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 PRKAR2BP31323 418 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 GUCA2AQ02747 115 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 PPP1R18Q6NYC8 613 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 FTSJ3Q8IY81 847 aaKnown RBP7.18□□□□□ -1.26
HDAC8-216ENST00000470998 USHBP1Q8N6Y0 703 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 ARHGAP45Q92619 1136 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 HLA-CQ95604 372 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 ARXQ96QS3 562 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 SYT17Q9BSW7 474 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 PDGFDQ9GZP0 370 aaPredicted RBP7.18□□□□□ -1.26
HDAC8-216ENST00000470998 TFCP2L1Q9NZI6 479 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 CCNL1Q9UK58 526 aaPredicted RBP7.18□□□□□ -1.26
HDAC8-216ENST00000470998 DDX19BQ9UMR2 479 aa7.18□□□□□ -1.26
HDAC8-216ENST00000470998 SOS1Q07889 1333 aaPredicted RBP7.18□□□□□ -1.26
HDAC8-216ENST00000470998 PPM1GO15355 546 aaPredicted RBP7.17□□□□□ -1.26
HDAC8-216ENST00000470998 CYP27B1O15528 508 aa7.17□□□□□ -1.26
HDAC8-216ENST00000470998 YY1P25490 414 aa7.17□□□□□ -1.26
HDAC8-216ENST00000470998 MVPQ14764 893 aaKnown RBP7.17□□□□□ -1.26
HDAC8-216ENST00000470998 RNF19BQ6ZMZ0 732 aa7.17□□□□□ -1.26
HDAC8-216ENST00000470998 IFNL2Q8IZJ0 200 aa7.17□□□□□ -1.26
HDAC8-216ENST00000470998 FHDC1Q9C0D6 1143 aaPredicted RBP7.17□□□□□ -1.26
HDAC8-216ENST00000470998 SMC4Q9NTJ3 1288 aa7.17□□□□□ -1.26
HDAC8-216ENST00000470998 RRP7AQ9Y3A4 280 aaKnown RBP7.17□□□□□ -1.26
HDAC8-216ENST00000470998 PNPLA7Q6ZV29 1317 aa7.17□□□□□ -1.26
HDAC8-216ENST00000470998 KDRP35968 1356 aa7.17□□□□□ -1.26
HDAC8-216ENST00000470998 BTAF1O14981 1849 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 SENP3-EIF4A1A0A087X0R7 540 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 BCAR3O75815 825 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 HSP90AB1P08238 724 aaKnown RBP7.16□□□□□ -1.26
HDAC8-216ENST00000470998 NDUFV2P19404 249 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 C20orf194Q5TEA3 1177 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 BRICD5Q6PL45 260 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 ATF7IPQ6VMQ6 1270 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 RIC3Q7Z5B4 369 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 DZIP1LQ8IYY4 767 aaKnown RBP7.16□□□□□ -1.26
HDAC8-216ENST00000470998 USB1Q9BQ65 265 aaKnown RBP7.16□□□□□ -1.26
HDAC8-216ENST00000470998 CHMP4AQ9BY43 222 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 BACH2Q9BYV9 841 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 RWDD1Q9H446 243 aaPredicted RBP7.16□□□□□ -1.26
HDAC8-216ENST00000470998 PALLDQ8WX93 1383 aa7.16□□□□□ -1.26
HDAC8-216ENST00000470998 HTATSF1O43719 755 aaKnown RBP7.15□□□□□ -1.26
HDAC8-216ENST00000470998 EIF5BO60841 1220 aaKnown RBP7.15□□□□□ -1.26
HDAC8-216ENST00000470998 ZNF853P0CG23 659 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 PHKG2P15735 406 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 EIF4A2Q14240 407 aaKnown RBP7.15□□□□□ -1.26
HDAC8-216ENST00000470998 CSPP1Q1MSJ5 1256 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 AMOTQ4VCS5 1084 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 PLEKHO1Q53GL0 409 aaPredicted RBP7.15□□□□□ -1.26
HDAC8-216ENST00000470998 RSBN1LQ6PCB5 846 aaPredicted RBP7.15□□□□□ -1.26
HDAC8-216ENST00000470998 MPRIPQ6WCQ1 1025 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 GAS2L2Q8NHY3 880 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 ANP32EQ9BTT0 268 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 FAM117AQ9C073 453 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 BABAM1Q9NWV8 329 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 IGSF1Q8N6C5 1336 aa7.15□□□□□ -1.26
HDAC8-216ENST00000470998 SPDYE5A6NIY4 337 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 RGS20O76081 388 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 GJA5P36382 358 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms