RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.21
HDAC3-203ENST00000467533 ABCC4O15439 1325 aa13.77□□□□□ -0.21
HDAC3-203ENST00000467533 TBC1D8O95759 1140 aa13.77□□□□□ -0.21
HDAC3-203ENST00000467533 UBN2Q6ZU65 1347 aa13.77□□□□□ -0.21
HDAC3-203ENST00000467533 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
HDAC3-203ENST00000467533 NGEFQ8N5V2 710 aa13.77□□□□□ -0.21
HDAC3-203ENST00000467533 PAPPA2Q9BXP8 1791 aa13.77□□□□□ -0.21
HDAC3-203ENST00000467533 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
HDAC3-203ENST00000467533 DUOX1Q9NRD9 1551 aa13.76□□□□□ -0.21
HDAC3-203ENST00000467533 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
HDAC3-203ENST00000467533 KIF6Q6ZMV9 814 aa13.76□□□□□ -0.21
HDAC3-203ENST00000467533 MPNDQ8N594 471 aa13.76□□□□□ -0.21
HDAC3-203ENST00000467533 MAP3K15Q6ZN16 1313 aa13.75□□□□□ -0.21
HDAC3-203ENST00000467533 YDJCA8MPS7 323 aa13.75□□□□□ -0.21
HDAC3-203ENST00000467533 EGFRP00533 1210 aa13.75□□□□□ -0.21
HDAC3-203ENST00000467533 SUSD4Q5VX71 490 aa13.75□□□□□ -0.21
HDAC3-203ENST00000467533 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
HDAC3-203ENST00000467533 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
HDAC3-203ENST00000467533 ANKRD36CQ5JPF3 1778 aa13.75□□□□□ -0.21
HDAC3-203ENST00000467533 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
HDAC3-203ENST00000467533 LRRC37AA6NMS7 1700 aa13.74□□□□□ -0.21
HDAC3-203ENST00000467533 ERVV-1B6SEH8 477 aa13.74□□□□□ -0.21
HDAC3-203ENST00000467533 NTSR2O95665 410 aa13.74□□□□□ -0.21
HDAC3-203ENST00000467533 DPF2Q92785 391 aa13.74□□□□□ -0.21
HDAC3-203ENST00000467533 CDCA5Q96FF9 252 aa13.74□□□□□ -0.21
HDAC3-203ENST00000467533 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
HDAC3-203ENST00000467533 GPR25O00155 361 aa13.73□□□□□ -0.21
HDAC3-203ENST00000467533 PSMD14O00487 310 aa13.73□□□□□ -0.21
HDAC3-203ENST00000467533 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
HDAC3-203ENST00000467533 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
HDAC3-203ENST00000467533 DLL1O00548 723 aa13.72□□□□□ -0.21
HDAC3-203ENST00000467533 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
HDAC3-203ENST00000467533 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
HDAC3-203ENST00000467533 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
HDAC3-203ENST00000467533 TAF1P21675 1872 aa13.72□□□□□ -0.21
HDAC3-203ENST00000467533 FKTNO75072 461 aa13.71□□□□□ -0.21
HDAC3-203ENST00000467533 RPS12P25398 132 aaKnown RBP13.71□□□□□ -0.21
HDAC3-203ENST00000467533 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
HDAC3-203ENST00000467533 TTLL7Q6ZT98 887 aa13.71□□□□□ -0.21
HDAC3-203ENST00000467533 MCM10Q7L590 875 aa13.71□□□□□ -0.21
HDAC3-203ENST00000467533 RTF1Q92541 710 aaKnown RBP13.71□□□□□ -0.21
HDAC3-203ENST00000467533 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.21
HDAC3-203ENST00000467533 BBOX1O75936 387 aa13.7□□□□□ -0.22
HDAC3-203ENST00000467533 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
HDAC3-203ENST00000467533 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
HDAC3-203ENST00000467533 RRP7AQ9Y3A4 280 aaKnown RBP13.7□□□□□ -0.22
HDAC3-203ENST00000467533 KDM3BQ7LBC6 1761 aa13.7□□□□□ -0.22
HDAC3-203ENST00000467533 ASTN2O75129 1339 aaPredicted RBP13.69□□□□□ -0.22
HDAC3-203ENST00000467533 MYL6BP14649 208 aa13.69□□□□□ -0.22
HDAC3-203ENST00000467533 FKBP1BP68106 108 aa13.69□□□□□ -0.22
HDAC3-203ENST00000467533 INTS3Q68E01 1043 aaKnown RBP13.69□□□□□ -0.22
HDAC3-203ENST00000467533 ZNF34Q8IZ26 560 aa13.69□□□□□ -0.22
HDAC3-203ENST00000467533 PRKAR2BP31323 418 aa13.68□□□□□ -0.22
HDAC3-203ENST00000467533 WASHC4Q2M389 1173 aa13.68□□□□□ -0.22
HDAC3-203ENST00000467533 PARP10Q53GL7 1025 aa13.68□□□□□ -0.22
HDAC3-203ENST00000467533 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
HDAC3-203ENST00000467533 PHACTR3Q96KR7 559 aa13.68□□□□□ -0.22
HDAC3-203ENST00000467533 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
HDAC3-203ENST00000467533 ECE2O60344 883 aa13.67□□□□□ -0.22
HDAC3-203ENST00000467533 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
HDAC3-203ENST00000467533 MKRN3Q13064 507 aaKnown RBP13.67□□□□□ -0.22
HDAC3-203ENST00000467533 GRAPQ13588 217 aa13.67□□□□□ -0.22
HDAC3-203ENST00000467533 ANGEL2Q5VTE6 544 aaKnown RBP13.67□□□□□ -0.22
HDAC3-203ENST00000467533 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
HDAC3-203ENST00000467533 MOB2Q70IA6 237 aa13.67□□□□□ -0.22
HDAC3-203ENST00000467533 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
HDAC3-203ENST00000467533 UTP14AQ9BVJ6 771 aaKnown RBP13.67□□□□□ -0.22
HDAC3-203ENST00000467533 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
HDAC3-203ENST00000467533 MKI67P46013 3256 aaKnown RBP13.66□□□□□ -0.22
HDAC3-203ENST00000467533 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
HDAC3-203ENST00000467533 TM4SF4P48230 202 aa13.66□□□□□ -0.22
HDAC3-203ENST00000467533 EIF4G2P78344 907 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC3-203ENST00000467533 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
HDAC3-203ENST00000467533 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
HDAC3-203ENST00000467533 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
HDAC3-203ENST00000467533 SCN9AQ15858 1988 aa13.65□□□□□ -0.22
HDAC3-203ENST00000467533 UBE2Q2LH0YL09 131 aa13.65□□□□□ -0.22
HDAC3-203ENST00000467533 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
HDAC3-203ENST00000467533 SLC10A5Q5PT55 438 aa13.65□□□□□ -0.22
HDAC3-203ENST00000467533 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
HDAC3-203ENST00000467533 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
HDAC3-203ENST00000467533 C6orf229H3BNL8 230 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 HCLS1P14317 486 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-203ENST00000467533 EN2P19622 333 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-203ENST00000467533 DOK7Q18PE1 504 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 OTOP1Q7RTM1 612 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 CFHR5Q9BXR6 569 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 R3HDMLQ9H3Y0 253 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 KCNQ5Q9NR82 932 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
HDAC3-203ENST00000467533 HTTP42858 3142 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 PSME4Q14997 1843 aa13.64□□□□□ -0.23
HDAC3-203ENST00000467533 SCARF1Q14162 830 aa13.63□□□□□ -0.23
HDAC3-203ENST00000467533 EYA3Q99504 573 aa13.63□□□□□ -0.23
HDAC3-203ENST00000467533 MIS18AQ9NYP9 233 aa13.63□□□□□ -0.23
HDAC3-203ENST00000467533 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
HDAC3-203ENST00000467533 SCAF8Q9UPN6 1271 aaKnown RBP13.62□□□□□ -0.23
HDAC3-203ENST00000467533 ZNF609O15014 1411 aa13.62□□□□□ -0.23
HDAC3-203ENST00000467533 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms