RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 GPC2Q8N158 579 aa13□□□□□ -0.33
APP-213ENST00000464867 KCNK17Q96T54 332 aa13□□□□□ -0.33
APP-213ENST00000464867 A0A087WZG4 1122 aa12.99□□□□□ -0.33
APP-213ENST00000464867 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
APP-213ENST00000464867 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
APP-213ENST00000464867 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
APP-213ENST00000464867 CYP19A1P11511 503 aaPredicted RBP12.98□□□□□ -0.33
APP-213ENST00000464867 ST5P78524 1137 aa12.98□□□□□ -0.33
APP-213ENST00000464867 FKBP4Q02790 459 aaKnown RBP eCLIP12.98□□□□□ -0.33
APP-213ENST00000464867 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
APP-213ENST00000464867 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
APP-213ENST00000464867 COL11A2P13942 1736 aaPredicted RBP12.98□□□□□ -0.33
APP-213ENST00000464867 SRGNP10124 158 aa12.97□□□□□ -0.33
APP-213ENST00000464867 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
APP-213ENST00000464867 CST9Q5W186 159 aa12.97□□□□□ -0.33
APP-213ENST00000464867 CIAPIN1Q6FI81 312 aa12.97□□□□□ -0.33
APP-213ENST00000464867 PRR5LQ6MZQ0 368 aa12.97□□□□□ -0.33
APP-213ENST00000464867 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
APP-213ENST00000464867 CCDC24Q8N4L8 307 aa12.97□□□□□ -0.33
APP-213ENST00000464867 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
APP-213ENST00000464867 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
APP-213ENST00000464867 CANXP27824 592 aaKnown RBP12.96□□□□□ -0.33
APP-213ENST00000464867 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
APP-213ENST00000464867 CNBD1Q8NA66 436 aa12.96□□□□□ -0.33
APP-213ENST00000464867 HHIPL1Q96JK4 782 aa12.96□□□□□ -0.33
APP-213ENST00000464867 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
APP-213ENST00000464867 GJA3Q9Y6H8 435 aa12.96□□□□□ -0.33
APP-213ENST00000464867 TK2O00142 265 aa12.95□□□□□ -0.34
APP-213ENST00000464867 FZD9O00144 591 aa12.95□□□□□ -0.34
APP-213ENST00000464867 HRO43593 1189 aa12.95□□□□□ -0.34
APP-213ENST00000464867 FMR1Q06787 632 aaKnown RBP eCLIP12.95□□□□□ -0.34
APP-213ENST00000464867 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
APP-213ENST00000464867 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
APP-213ENST00000464867 NPM2Q86SE8 214 aaKnown RBP12.95□□□□□ -0.34
APP-213ENST00000464867 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
APP-213ENST00000464867 TESK2Q96S53 571 aa12.95□□□□□ -0.34
APP-213ENST00000464867 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
APP-213ENST00000464867 TRAF5O00463 557 aa12.94□□□□□ -0.34
APP-213ENST00000464867 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
APP-213ENST00000464867 NOGQ13253 232 aa12.94□□□□□ -0.34
APP-213ENST00000464867 USP50Q70EL3 339 aaPredicted RBP12.94□□□□□ -0.34
APP-213ENST00000464867 CELF2O95319 508 aaKnown RBP12.93□□□□□ -0.34
APP-213ENST00000464867 STARD3NLO95772 234 aa12.93□□□□□ -0.34
APP-213ENST00000464867 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
APP-213ENST00000464867 AKAP4Q5JQC9 854 aa12.92□□□□□ -0.34
APP-213ENST00000464867 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
APP-213ENST00000464867 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
APP-213ENST00000464867 C7orf43Q8WVR3 580 aa12.92□□□□□ -0.34
APP-213ENST00000464867 ADAM33Q9BZ11 813 aa12.92□□□□□ -0.34
APP-213ENST00000464867 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
APP-213ENST00000464867 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
APP-213ENST00000464867 DPYSL4O14531 572 aa12.91□□□□□ -0.34
APP-213ENST00000464867 NPR1P16066 1061 aa12.91□□□□□ -0.34
APP-213ENST00000464867 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
APP-213ENST00000464867 ZNF330Q9Y3S2 320 aaPredicted RBP12.91□□□□□ -0.34
APP-213ENST00000464867 EPS15P42566 896 aa12.9□□□□□ -0.34
APP-213ENST00000464867 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.34
APP-213ENST00000464867 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
APP-213ENST00000464867 ZNF408Q9H9D4 720 aa12.9□□□□□ -0.34
APP-213ENST00000464867 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.34
APP-213ENST00000464867 SAGE1Q9NXZ1 904 aa12.9□□□□□ -0.34
APP-213ENST00000464867 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
APP-213ENST00000464867 VPS9D1Q9Y2B5 631 aa12.9□□□□□ -0.34
APP-213ENST00000464867 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
APP-213ENST00000464867 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
APP-213ENST00000464867 CTU1Q7Z7A3 348 aaKnown RBP12.89□□□□□ -0.35
APP-213ENST00000464867 AKAP11Q9UKA4 1901 aa12.89□□□□□ -0.35
APP-213ENST00000464867 PTPREP23469 700 aa12.88□□□□□ -0.35
APP-213ENST00000464867 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
APP-213ENST00000464867 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
APP-213ENST00000464867 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
APP-213ENST00000464867 SCNN1DP51172 638 aa12.87□□□□□ -0.35
APP-213ENST00000464867 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
APP-213ENST00000464867 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
APP-213ENST00000464867 PSMD1Q99460 953 aa12.87□□□□□ -0.35
APP-213ENST00000464867 CARD14Q9BXL6 1004 aa12.87□□□□□ -0.35
APP-213ENST00000464867 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
APP-213ENST00000464867 SCN7AQ01118 1682 aa12.86□□□□□ -0.35
APP-213ENST00000464867 TRPA1O75762 1119 aa12.86□□□□□ -0.35
APP-213ENST00000464867 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
APP-213ENST00000464867 HPS5Q9UPZ3 1129 aa12.86□□□□□ -0.35
APP-213ENST00000464867 BCORQ6W2J9 1755 aa12.85□□□□□ -0.35
APP-213ENST00000464867 IL6STP40189 918 aaPredicted RBP12.85□□□□□ -0.35
APP-213ENST00000464867 HUNKP57058 714 aa12.85□□□□□ -0.35
APP-213ENST00000464867 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
APP-213ENST00000464867 OLFM4Q6UX06 510 aa12.85□□□□□ -0.35
APP-213ENST00000464867 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
APP-213ENST00000464867 CCDC102AQ96A19 550 aa12.85□□□□□ -0.35
APP-213ENST00000464867 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
APP-213ENST00000464867 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
APP-213ENST00000464867 TPTE2Q6XPS3 522 aa12.84□□□□□ -0.35
APP-213ENST00000464867 CDC37L1Q7L3B6 337 aa12.84□□□□□ -0.35
APP-213ENST00000464867 ZIC5Q96T25 663 aa12.84□□□□□ -0.35
APP-213ENST00000464867 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
APP-213ENST00000464867 RNF186Q9NXI6 227 aa12.84□□□□□ -0.35
APP-213ENST00000464867 HDAC9Q9UKV0 1011 aa12.84□□□□□ -0.35
APP-213ENST00000464867 DLL1O00548 723 aa12.83□□□□□ -0.36
APP-213ENST00000464867 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
APP-213ENST00000464867 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
APP-213ENST00000464867 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms