RNA–Protein interactions for RNA: ENST00000463563.6

U2SURP-203, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 2

Gene U2SURP, Length 4,364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-203ENST00000463563 USP4Q13107 963 aa3.36□□□□□ -1.87
U2SURP-203ENST00000463563 PTCRAQ6ISU1 281 aaPredicted RBP3.36□□□□□ -1.87
U2SURP-203ENST00000463563 PPARGC1BQ86YN6 1023 aaKnown RBP3.36□□□□□ -1.87
U2SURP-203ENST00000463563 CDC5LQ99459 802 aaKnown RBP3.36□□□□□ -1.87
U2SURP-203ENST00000463563 C2orf49Q9BVC5 232 aaPredicted RBP3.36□□□□□ -1.87
U2SURP-203ENST00000463563 NRBP1Q9UHY1 535 aa3.36□□□□□ -1.87
U2SURP-203ENST00000463563 SALL2Q9Y467 1007 aaPredicted RBP3.36□□□□□ -1.87
U2SURP-203ENST00000463563 MYL1P05976 194 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 BRDTQ58F21 947 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 HDGFL2Q7Z4V5 671 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 DZIP3Q86Y13 1208 aaKnown RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 KBTBD4Q9NVX7 518 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 LEMD3Q9Y2U8 911 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 KCNQ2O43526 872 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 PDGFAP04085 211 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 CCNYL3P0C7X3 344 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 EIF4BP23588 611 aaKnown RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 FOXK2Q01167 660 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 MAP3K10Q02779 954 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 POU5F1BQ06416 359 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 LRRC41Q15345 812 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 DALRD3Q5D0E6 543 aaKnown RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 ALKBH2Q6NS38 261 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 CCDC174Q6PII3 467 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 EAF1Q96JC9 268 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 GINM1Q9NU53 330 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 CHMP3Q9Y3E7 222 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 PCDHB11Q9Y5F2 797 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 CLGNO14967 610 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 PPP4CP60510 307 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 NFX1Q12986 1120 aaKnown RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 TAF1CQ15572 869 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 NFE2Q16621 373 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 ERFEQ4G0M1 354 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 TBCELQ5QJ74 424 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 DRC7Q8IY82 874 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 ZNF512BQ96KM6 892 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 CEP63Q96MT8 703 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 SMAD5Q99717 465 aaKnown RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.35□□□□□ -1.877e-8■■■■■ 57.9
U2SURP-203ENST00000463563 FAM13BQ9NYF5 915 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 A6NHS1 94 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 KIF3BO15066 747 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 RGS20O76081 388 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 LDHCP07864 332 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 NOS2P35228 1153 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 TRAPPC10P48553 1259 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 SLC4A3P48751 1232 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 RAPGEF1Q13905 1077 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 NBPF14Q5TI25 921 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 USPL1Q5W0Q7 1092 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 CCSAPQ6IQ19 270 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 ZBTB33Q86T24 672 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 TTC30BQ8N4P2 665 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 VPS37AQ8NEZ2 397 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 APPBP2Q92624 585 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 APBA2Q99767 749 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 RSPH9Q9H1X1 276 aaPredicted RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 GEMIN8Q9NWZ8 242 aaKnown RBP3.35□□□□□ -1.87
U2SURP-203ENST00000463563 LZTS1Q9Y250 596 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 SCINQ9Y6U3 715 aa3.35□□□□□ -1.87
U2SURP-203ENST00000463563 CFAP69A5D8W1 941 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 BPNT1O95861 308 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 SOX9P48436 509 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 ST13P50502 369 aaKnown RBP3.34□□□□□ -1.87
U2SURP-203ENST00000463563 EXOSC10Q01780 885 aaKnown RBP3.34□□□□□ -1.87
U2SURP-203ENST00000463563 ARSHQ5FYA8 562 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 POTEAQ6S8J7 498 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 FAM160A2Q8N612 972 aaPredicted RBP3.34□□□□□ -1.87
U2SURP-203ENST00000463563 EPS8L3Q8TE67 593 aaKnown RBP3.34□□□□□ -1.87
U2SURP-203ENST00000463563 CHMP7Q8WUX9 453 aaPredicted RBP3.34□□□□□ -1.87
U2SURP-203ENST00000463563 KCNK17Q96T54 332 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 CARD14Q9BXL6 1004 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 GGNBP2Q9H3C7 697 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 PRDM9Q9NQV7 894 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 RPGRIP1LQ68CZ1 1315 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 F6X3S4 739 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 DXOO77932 396 aaKnown RBP3.34□□□□□ -1.87
U2SURP-203ENST00000463563 CT47B1P0C2W7 299 aaPredicted RBP3.34□□□□□ -1.87
U2SURP-203ENST00000463563 TOMM20Q15388 145 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 ANO1Q5XXA6 986 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 LRP10Q7Z4F1 713 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 TRPM4Q8TD43 1214 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 EFR3BQ9Y2G0 817 aa3.34□□□□□ -1.87
U2SURP-203ENST00000463563 SLC26A4O43511 780 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 NR1I2O75469 434 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 IFIT2P09913 472 aaKnown RBP3.34□□□□□ -1.88
U2SURP-203ENST00000463563 CDC27P30260 824 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 KCTD2Q14681 263 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 HSCBQ8IWL3 235 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 SCUBE3Q8IX30 993 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 SDR16C5Q8N3Y7 309 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 FAM169BQ8N8A8 192 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 ARMC2Q8NEN0 867 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 EDEM1Q92611 657 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 ZNF622Q969S3 477 aaKnown RBP eCLIP3.34□□□□□ -1.883e-8■■■□□ 14.9
U2SURP-203ENST00000463563 NUDT12Q9BQG2 462 aa3.34□□□□□ -1.88
U2SURP-203ENST00000463563 TRIM56Q9BRZ2 755 aaKnown RBP3.34□□□□□ -1.88
U2SURP-203ENST00000463563 LRRC27Q9C0I9 530 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms