RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 AIMP1Q12904 312 aaKnown RBP27.2■■□□□ 1.94
CPSF7-209ENST00000463244 NECTIN2Q92692 538 aa27.2■■□□□ 1.94
CPSF7-209ENST00000463244 CDHR2Q9BYE9 1310 aa27.19■■□□□ 1.94
CPSF7-209ENST00000463244 TCIRG1Q13488 830 aa27.19■■□□□ 1.94
CPSF7-209ENST00000463244 CIAPIN1Q6FI81 312 aa27.19■■□□□ 1.94
CPSF7-209ENST00000463244 TRMT112Q9UI30 125 aaKnown RBP27.19■■□□□ 1.94
CPSF7-209ENST00000463244 GRM1Q13255 1194 aa27.18■■□□□ 1.94
CPSF7-209ENST00000463244 GRAPQ13588 217 aa27.18■■□□□ 1.94
CPSF7-209ENST00000463244 DDX46Q7L014 1031 aaKnown RBP27.18■■□□□ 1.94
CPSF7-209ENST00000463244 GRAPLQ8TC17 118 aaPredicted RBP27.18■■□□□ 1.94
CPSF7-209ENST00000463244 ABHD8Q96I13 439 aa27.18■■□□□ 1.94
CPSF7-209ENST00000463244 BEGAINQ9BUH8 593 aa27.18■■□□□ 1.94
CPSF7-209ENST00000463244 PGAP2Q9UHJ9 254 aa27.18■■□□□ 1.94
CPSF7-209ENST00000463244 SH3TC1Q8TE82 1336 aa27.17■■□□□ 1.94
CPSF7-209ENST00000463244 DUOX1Q9NRD9 1551 aa27.17■■□□□ 1.94
CPSF7-209ENST00000463244 LRRC37AA6NMS7 1700 aa27.16■■□□□ 1.94
CPSF7-209ENST00000463244 SAPCD2Q86UD0 394 aa27.16■■□□□ 1.94
CPSF7-209ENST00000463244 RAD17O75943 681 aa27.15■■□□□ 1.94
CPSF7-209ENST00000463244 CELF2O95319 508 aaKnown RBP27.15■■□□□ 1.94
CPSF7-209ENST00000463244 MAP2K2P36507 400 aa27.15■■□□□ 1.94
CPSF7-209ENST00000463244 TNIP1Q15025 636 aa27.15■■□□□ 1.94
CPSF7-209ENST00000463244 RALBP1Q15311 655 aa27.15■■□□□ 1.94
CPSF7-209ENST00000463244 ZC3H15Q8WU90 426 aaKnown RBP27.15■■□□□ 1.94
CPSF7-209ENST00000463244 BCL2L13Q9BXK5 485 aa27.15■■□□□ 1.94
CPSF7-209ENST00000463244 GLIS2Q9BZE0 524 aaPredicted RBP27.15■■□□□ 1.94
CPSF7-209ENST00000463244 DDX60Q8IY21 1712 aaKnown RBP27.15■■□□□ 1.94
CPSF7-209ENST00000463244 KRT24Q2M2I5 525 aa27.14■■□□□ 1.94
CPSF7-209ENST00000463244 TMC4Q7Z404 712 aa27.14■■□□□ 1.94
CPSF7-209ENST00000463244 YDJCA8MPS7 323 aa27.13■■□□□ 1.93
CPSF7-209ENST00000463244 CHL1O00533 1208 aa27.13■■□□□ 1.93
CPSF7-209ENST00000463244 AOC2O75106 756 aa27.13■■□□□ 1.93
CPSF7-209ENST00000463244 HIRAP54198 1017 aaPredicted RBP27.13■■□□□ 1.93
CPSF7-209ENST00000463244 TRPM4Q8TD43 1214 aa27.12■■□□□ 1.93
CPSF7-209ENST00000463244 HHIPL1Q96JK4 782 aa27.12■■□□□ 1.93
CPSF7-209ENST00000463244 CHPF2Q9P2E5 772 aa27.12■■□□□ 1.93
CPSF7-209ENST00000463244 NEUROD2Q15784 382 aa27.1■■□□□ 1.93
CPSF7-209ENST00000463244 CNOT7Q9UIV1 285 aaKnown RBP27.1■■□□□ 1.93
CPSF7-209ENST00000463244 SHTN1A0MZ66 631 aa27.09■■□□□ 1.93
CPSF7-209ENST00000463244 CCDC146Q8IYE0 955 aa27.09■■□□□ 1.93
CPSF7-209ENST00000463244 PLBD2Q8NHP8 589 aa27.09■■□□□ 1.93
CPSF7-209ENST00000463244 ZNF428Q96B54 188 aa27.09■■□□□ 1.93
CPSF7-209ENST00000463244 CDC37L1Q7L3B6 337 aa27.08■■□□□ 1.93
CPSF7-209ENST00000463244 ISCA1Q9BUE6 129 aa27.08■■□□□ 1.93
CPSF7-209ENST00000463244 TSKSQ9UJT2 592 aa27.08■■□□□ 1.93
CPSF7-209ENST00000463244 TRIM35Q9UPQ4 493 aa27.08■■□□□ 1.93
CPSF7-209ENST00000463244 H7C1D1 291 aa27.07■■□□□ 1.92
CPSF7-209ENST00000463244 HDGFL1Q5TGJ6 251 aa27.07■■□□□ 1.92
CPSF7-209ENST00000463244 ANKRD13DQ6ZTN6 518 aa27.07■■□□□ 1.92
CPSF7-209ENST00000463244 MICALL2Q8IY33 904 aa27.07■■□□□ 1.92
CPSF7-209ENST00000463244 ZNF408Q9H9D4 720 aa27.07■■□□□ 1.92
CPSF7-209ENST00000463244 CA12O43570 354 aa27.06■■□□□ 1.92
CPSF7-209ENST00000463244 HOXB7P09629 217 aa27.06■■□□□ 1.92
CPSF7-209ENST00000463244 SF3B3Q15393 1217 aaKnown RBP27.06■■□□□ 1.92
CPSF7-209ENST00000463244 WASHC4Q2M389 1173 aa27.06■■□□□ 1.92
CPSF7-209ENST00000463244 DPF2Q92785 391 aa27.06■■□□□ 1.92
CPSF7-209ENST00000463244 CELF1Q92879 486 aaKnown RBP27.06■■□□□ 1.92
CPSF7-209ENST00000463244 FAM89AQ96GI7 184 aa27.06■■□□□ 1.92
CPSF7-209ENST00000463244 LAS1LQ9Y4W2 734 aaKnown RBP27.06■■□□□ 1.92
CPSF7-209ENST00000463244 COL4A1P02462 1669 aa27.05■■□□□ 1.92
CPSF7-209ENST00000463244 BRPF1P55201 1214 aaPredicted RBP27.05■■□□□ 1.92
CPSF7-209ENST00000463244 DBF4Q9UBU7 674 aaPredicted RBP27.05■■□□□ 1.92
CPSF7-209ENST00000463244 NSFL1CQ9UNZ2 370 aaKnown RBP27.05■■□□□ 1.92
CPSF7-209ENST00000463244 ZBTB12Q9Y330 459 aaPredicted RBP27.05■■□□□ 1.92
CPSF7-209ENST00000463244 CASP8AP2Q9UKL3 1982 aa27.05■■□□□ 1.92
CPSF7-209ENST00000463244 POLR2AP24928 1970 aaKnown RBP27.04■■□□□ 1.92
CPSF7-209ENST00000463244 PSMD14O00487 310 aa27.04■■□□□ 1.92
CPSF7-209ENST00000463244 ATP5J2-PTCD1G3V325 749 aa27.03■■□□□ 1.92
CPSF7-209ENST00000463244 RUNDC1Q96C34 613 aa27.03■■□□□ 1.92
CPSF7-209ENST00000463244 MYBBP1AQ9BQG0 1328 aaKnown RBP27.03■■□□□ 1.92
CPSF7-209ENST00000463244 DBNDD1Q9H9R9 158 aa27.03■■□□□ 1.92
CPSF7-209ENST00000463244 FAM161AQ3B820 660 aa27.02■■□□□ 1.92
CPSF7-209ENST00000463244 SAMD7Q7Z3H4 446 aa27.02■■□□□ 1.92
CPSF7-209ENST00000463244 USP48Q86UV5 1035 aa27.02■■□□□ 1.92
CPSF7-209ENST00000463244 POLLQ9UGP5 575 aa27.02■■□□□ 1.92
CPSF7-209ENST00000463244 CCDC85CA6NKD9 419 aa27■■□□□ 1.91
CPSF7-209ENST00000463244 C6orf229H3BNL8 230 aa27■■□□□ 1.91
CPSF7-209ENST00000463244 RIMBP2O15034 1052 aa27■■□□□ 1.91
CPSF7-209ENST00000463244 GPSM2P81274 684 aa27■■□□□ 1.91
CPSF7-209ENST00000463244 TRIM28Q13263 835 aaKnown RBP27■■□□□ 1.91
CPSF7-209ENST00000463244 HYPKQ9NX55 129 aa27■■□□□ 1.91
CPSF7-209ENST00000463244 RPS12P25398 132 aaKnown RBP26.99■■□□□ 1.91
CPSF7-209ENST00000463244 HUNKP57058 714 aa26.99■■□□□ 1.91
CPSF7-209ENST00000463244 NOGQ13253 232 aa26.99■■□□□ 1.91
CPSF7-209ENST00000463244 DLK2Q6UY11 383 aa26.99■■□□□ 1.91
CPSF7-209ENST00000463244 RTL9Q8NET4 1388 aa26.98■■□□□ 1.91
CPSF7-209ENST00000463244 IRS4O14654 1257 aaPredicted RBP26.98■■□□□ 1.91
CPSF7-209ENST00000463244 ECE2O60344 883 aa26.98■■□□□ 1.91
CPSF7-209ENST00000463244 EGFRP00533 1210 aa26.98■■□□□ 1.91
CPSF7-209ENST00000463244 TBC1D10BQ4KMP7 808 aaPredicted RBP26.98■■□□□ 1.91
CPSF7-209ENST00000463244 RTL5Q5HYW3 569 aaPredicted RBP26.98■■□□□ 1.91
CPSF7-209ENST00000463244 CFAP44Q96MT7 982 aa26.98■■□□□ 1.91
CPSF7-209ENST00000463244 EYA3Q99504 573 aa26.98■■□□□ 1.91
CPSF7-209ENST00000463244 KCNQ5Q9NR82 932 aa26.98■■□□□ 1.91
CPSF7-209ENST00000463244 SCN9AQ15858 1988 aa26.98■■□□□ 1.91
CPSF7-209ENST00000463244 WDR43Q15061 677 aaKnown RBP eCLIP26.97■■□□□ 1.91
CPSF7-209ENST00000463244 DUSP27Q5VZP5 1158 aa26.97■■□□□ 1.91
CPSF7-209ENST00000463244 KRT26Q7Z3Y9 468 aa26.97■■□□□ 1.91
CPSF7-209ENST00000463244 ZIC5Q96T25 663 aa26.97■■□□□ 1.91
CPSF7-209ENST00000463244 RGS19P49795 217 aa26.96■■□□□ 1.91
CPSF7-209ENST00000463244 RPS8P62241 208 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms