RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 MED23Q9ULK4 1368 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 A0A087WWV3 80 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 PSMA5P28066 241 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 FOSBP53539 338 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 KSR2Q6VAB6 950 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 ERC1Q8IUD2 1116 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 BICD2Q8TD16 824 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 MYH15Q9Y2K3 1946 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 IGSF3O75054 1194 aa13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 PDCP20941 246 aa13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 ARID5BQ14865 1188 aa13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 CACTINQ8WUQ7 758 aaKnown RBP13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 RBM33Q96EV2 1170 aaKnown RBP13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 SCAND2PQ9GZW5 306 aaPredicted RBP13.89□□□□□ -0.19
PDZRN3-203ENST00000462146 ALDH1L1O75891 902 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 KCNA6P17658 529 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 ZNF165P49910 485 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 RBM43Q6ZSC3 357 aaKnown RBP13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 LAMA4Q16363 1823 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 GRM8O00222 908 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 IP6K1Q92551 441 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 BRF1Q92994 677 aa13.88□□□□□ -0.19
PDZRN3-203ENST00000462146 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 DDX19AQ9NUU7 478 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 TNNT1P13805 278 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 RESTQ13127 1097 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 C11orf57Q6ZUT1 292 aaPredicted RBP13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 SEC62Q99442 399 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 NFAT5O94916 1531 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 RNMTO43148 476 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 AKAP4Q5JQC9 854 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 RNF20Q5VTR2 975 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 ADGRL3Q9HAR2 1447 aa13.87□□□□□ -0.19
PDZRN3-203ENST00000462146 USP27XA6NNY8 438 aa13.86□□□□□ -0.19
PDZRN3-203ENST00000462146 HIP1O00291 1037 aa13.86□□□□□ -0.19
PDZRN3-203ENST00000462146 TAF5LO75529 589 aa13.86□□□□□ -0.19
PDZRN3-203ENST00000462146 ANKRD1Q15327 319 aa13.86□□□□□ -0.19
PDZRN3-203ENST00000462146 EPHA10Q5JZY3 1008 aa13.86□□□□□ -0.19
PDZRN3-203ENST00000462146 GTF3C6Q969F1 213 aa13.86□□□□□ -0.19
PDZRN3-203ENST00000462146 JCADQ9P266 1359 aa13.86□□□□□ -0.19
PDZRN3-203ENST00000462146 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 IGKV5-2P06315 115 aa13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 Q6ZUG5 572 aa13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 ANKARQ7Z5J8 1434 aa13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 SLIT1O75093 1534 aa13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 HSP90B1P14625 803 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 ZNF592Q92610 1267 aa13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 ERCC4Q92889 916 aaPredicted RBP13.85□□□□□ -0.19
PDZRN3-203ENST00000462146 TPD52L1Q16890 204 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 LINS1Q8NG48 757 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 SMTNL1A8MU46 457 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 SLFNL1Q499Z3 407 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 CCDC9Q9Y3X0 531 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 C5P01031 1676 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 ZNF609O15014 1411 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 SIPA1L3O60292 1781 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 SCRN1Q12765 414 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 IQCB1Q15051 598 aa13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 ALDH8A1Q9H2A2 487 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-203ENST00000462146 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 H3BQV1 296 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 MYL6BP14649 208 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 PDIA6Q15084 440 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 UTYO14607 1347 aa13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
PDZRN3-203ENST00000462146 HEG1Q9ULI3 1381 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 CYP21A2P08686 494 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 SLC39A6Q13433 755 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 HMG20BQ9P0W2 317 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 V9GYY5 206 aaPredicted RBP13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 ADD1P35611 737 aaKnown RBP13.82□□□□□ -0.2
PDZRN3-203ENST00000462146 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms