RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 DUOX2Q9NRD8 1548 aa13.53□□□□□ -0.24
SMARCAD1-204ENST00000457823 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 FGFR1OPO95684 399 aaKnown RBP13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 WDR78Q5VTH9 848 aa13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 CRNKL1Q9BZJ0 848 aaKnown RBP13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 MAP3K19Q56UN5 1328 aa13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 ATP6V1AP38606 617 aa13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 ALG1Q9BT22 464 aa13.52□□□□□ -0.24
SMARCAD1-204ENST00000457823 MSH6P52701 1360 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 CHMP4BP1P59074 171 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 Q6ZUG5 572 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 KIF20AO95235 890 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 NMIQ13287 307 aaPredicted RBP13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 CALML4Q96GE6 196 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 NLRP3Q96P20 1036 aa13.52□□□□□ -0.25
SMARCAD1-204ENST00000457823 KIAA0754O94854 1291 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 YEATS4O95619 227 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 KCNA6P17658 529 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 SYKP43405 635 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 USP48Q86UV5 1035 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 HELBQ8NG08 1087 aaPredicted RBP13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 FEZ1Q99689 392 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 NEMFO60524 1076 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 CAVIN2O95810 425 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 GSDMDP57764 484 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 ESR2Q92731 530 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 ZNF622Q969S3 477 aaKnown RBP eCLIP13.51□□□□□ -0.253e-6■■■□□ 15.6
SMARCAD1-204ENST00000457823 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 NIP7Q9Y221 180 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 NPATQ14207 1427 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 JAKMIP3Q5VZ66 844 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
SMARCAD1-204ENST00000457823 A0A1W2PP64 1363 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 SEC24BO95487 1268 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 CASQ1P31415 396 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 AMPD3Q01432 767 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 DNM1Q05193 864 aaKnown RBP13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 SNX21Q969T3 373 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 GBP3Q9H0R5 595 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 PAG1Q9NWQ8 432 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 TMTC2Q8N394 836 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 KRT23Q9C075 422 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 RRP9O43818 475 aaKnown RBP13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 USO1O60763 962 aaKnown RBP13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 KANK3Q6NY19 840 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 LRSAM1Q6UWE0 723 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
SMARCAD1-204ENST00000457823 RAPGEF6Q8TEU7 1601 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 CETN2P41208 172 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 G2E3Q7L622 706 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 PAFAH1B1P43034 410 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 DDB1Q16531 1140 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 CCDC40Q4G0X9 1142 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 HSP90AA4PQ58FG1 418 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 NAA16Q6N069 864 aaPredicted RBP13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 KRI1Q8N9T8 703 aaKnown RBP13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 IL2RBP14784 551 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 RTN1Q16799 776 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 UVSSAQ2YD98 709 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 N4BP3O15049 544 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 LUZP1Q86V48 1076 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 ZNF518AQ6AHZ1 1483 aa13.49□□□□□ -0.25
SMARCAD1-204ENST00000457823 TTC41PQ6P2S7 1318 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 IFIT1BQ5T764 474 aaKnown RBP13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 SCLT1Q96NL6 688 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 PRC1O43663 620 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 AFMP43652 599 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 KCNG4Q8TDN1 519 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 F13A1P00488 732 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 AK2P54819 239 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 DZIP3Q86Y13 1208 aaKnown RBP13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 CNNM2Q9H8M5 875 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 ERICH4A6NGS2 130 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 CHMLP26374 656 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 HOXC9P31274 260 aa13.48□□□□□ -0.25
SMARCAD1-204ENST00000457823 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
SMARCAD1-204ENST00000457823 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms