RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 CHL1O00533 1208 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 LBX1P52954 281 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 HSP90AB3PQ58FF7 597 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 CST9Q5W186 159 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 VPS33BQ9H267 617 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
DEPDC1B-202ENST00000453022 POLR2AP24928 1970 aaKnown RBP11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 HSPA8P11142 646 aaKnown RBP11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 SP8Q8IXZ3 490 aa11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 CHPF2Q9P2E5 772 aa11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
DEPDC1B-202ENST00000453022 BBOX1O75936 387 aa11.56□□□□□ -0.56
DEPDC1B-202ENST00000453022 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
DEPDC1B-202ENST00000453022 PSME4Q14997 1843 aa11.56□□□□□ -0.56
DEPDC1B-202ENST00000453022 NEUROD2Q15784 382 aa11.56□□□□□ -0.56
DEPDC1B-202ENST00000453022 SUPT20HQ8NEM7 779 aa11.56□□□□□ -0.56
DEPDC1B-202ENST00000453022 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
DEPDC1B-202ENST00000453022 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
DEPDC1B-202ENST00000453022 YDJCA8MPS7 323 aa11.55□□□□□ -0.56
DEPDC1B-202ENST00000453022 GRAPQ13588 217 aa11.55□□□□□ -0.56
DEPDC1B-202ENST00000453022 CYP4F22Q6NT55 531 aa11.55□□□□□ -0.56
DEPDC1B-202ENST00000453022 MPNDQ8N594 471 aa11.55□□□□□ -0.56
DEPDC1B-202ENST00000453022 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
DEPDC1B-202ENST00000453022 CAPNS2Q96L46 248 aa11.55□□□□□ -0.56
DEPDC1B-202ENST00000453022 CDHR2Q9BYE9 1310 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 RAD17O75943 681 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 MAP2K1Q02750 393 aaPredicted RBP11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 DDX46Q7L014 1031 aaKnown RBP11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 TLL2Q9Y6L7 1015 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 SPEF2Q9C093 1822 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 HIRAP54198 1017 aaPredicted RBP11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 PLBD2Q8NHP8 589 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 TRPM4Q8TD43 1214 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 GLIS2Q9BZE0 524 aaPredicted RBP11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 PGAP2Q9UHJ9 254 aa11.54□□□□□ -0.56
DEPDC1B-202ENST00000453022 MYH3P11055 1940 aa11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 HOXB7P09629 217 aa11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 ECE1P42892 770 aa11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 DDX10Q13206 875 aaKnown RBP11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 GRM1Q13255 1194 aa11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 PAXIP1Q6ZW49 1069 aaPredicted RBP11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 CELF1Q92879 486 aaKnown RBP11.53□□□□□ -0.56
DEPDC1B-202ENST00000453022 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.56
DEPDC1B-202ENST00000453022 ZNF646O15015 1829 aaPredicted RBP11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 AOC2O75106 756 aa11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 TMC4Q7Z404 712 aa11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 SAPCD2Q86UD0 394 aa11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 GPR101Q96P66 508 aaPredicted RBP11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 DBF4Q9UBU7 674 aaPredicted RBP11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 ADAMTS8Q9UP79 889 aa11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 TNRC18O15417 2968 aaPredicted RBP11.52□□□□□ -0.57
DEPDC1B-202ENST00000453022 TNIP1Q15025 636 aa11.51□□□□□ -0.57
DEPDC1B-202ENST00000453022 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
DEPDC1B-202ENST00000453022 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
DEPDC1B-202ENST00000453022 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
DEPDC1B-202ENST00000453022 BCL2L13Q9BXK5 485 aa11.51□□□□□ -0.57
DEPDC1B-202ENST00000453022 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
DEPDC1B-202ENST00000453022 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
DEPDC1B-202ENST00000453022 RTL5Q5HYW3 569 aaPredicted RBP11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 ZC3H15Q8WU90 426 aaKnown RBP11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 POLLQ9UGP5 575 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 CNOT7Q9UIV1 285 aaKnown RBP11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 PSMD14O00487 310 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 EGFRP00533 1210 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 GPSM2P81274 684 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 WASHC4Q2M389 1173 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 DLK2Q6UY11 383 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 ABHD8Q96I13 439 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 HHIPL1Q96JK4 782 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 DBNDD1Q9H9R9 158 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 HYPKQ9NX55 129 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 NSFL1CQ9UNZ2 370 aaKnown RBP11.5□□□□□ -0.57
DEPDC1B-202ENST00000453022 ZNF853P0CG23 659 aa11.49□□□□□ -0.57
DEPDC1B-202ENST00000453022 MAP2K2P36507 400 aa11.49□□□□□ -0.57
DEPDC1B-202ENST00000453022 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
DEPDC1B-202ENST00000453022 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms