RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 CHAMP1Q96JM3 812 aa19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 JAKMIP1Q96N16 626 aaKnown RBP19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 VGLL3A8MV65 326 aa19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 OFD1O75665 1012 aa19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 NASPP49321 788 aaPredicted RBP19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 CREB3L3Q68CJ9 461 aa19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 CAVIN1Q6NZI2 390 aaKnown RBP19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 ZSCAN30Q86W11 494 aa19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 JCADQ9P266 1359 aa19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 IGSF3O75054 1194 aa19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 CPA1P15085 419 aa19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 ZKSCAN1P17029 563 aaPredicted RBP19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 RPAP1Q9BWH6 1393 aaPredicted RBP19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 WDR33Q9C0J8 1336 aaKnown RBP19.46■□□□□ 0.71
PIKFYVE-206ENST00000443896 PDRG1Q9NUG6 133 aa19.45■□□□□ 0.7
PIKFYVE-206ENST00000443896 CYP46A1Q9Y6A2 500 aa19.45■□□□□ 0.7
PIKFYVE-206ENST00000443896 CCDC191Q8NCU4 936 aa19.45■□□□□ 0.7
PIKFYVE-206ENST00000443896 RFX7Q2KHR2 1363 aa19.45■□□□□ 0.7
PIKFYVE-206ENST00000443896 ZSCAN23Q3MJ62 389 aa19.45■□□□□ 0.7
PIKFYVE-206ENST00000443896 MPNDQ8N594 471 aa19.45■□□□□ 0.7
PIKFYVE-206ENST00000443896 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.45■□□□□ 0.7
PIKFYVE-206ENST00000443896 ANP32BQ92688 251 aaKnown RBP19.44■□□□□ 0.7
PIKFYVE-206ENST00000443896 FAM177BA6PVY3 158 aa19.44■□□□□ 0.7
PIKFYVE-206ENST00000443896 SLC27A2O14975 620 aa19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 EDC3Q96F86 508 aaKnown RBP19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 DBNDD2Q9BQY9 259 aa19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 KCNJ4P48050 445 aa19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 ZSCAN31Q96LW9 406 aaPredicted RBP19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 LARP6Q9BRS8 491 aaKnown RBP19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 TMOD3Q9NYL9 352 aa19.43■□□□□ 0.7
PIKFYVE-206ENST00000443896 CBX1P83916 185 aa19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 ATG9AQ7Z3C6 839 aa19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 HAUS7Q99871 368 aa19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 SH2B1Q9NRF2 756 aaPredicted RBP19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 LARGE1O95461 756 aa19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 ZNF589Q86UQ0 364 aaPredicted RBP19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 MBD3O95983 291 aa19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 PLCD3Q8N3E9 789 aa19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
PIKFYVE-206ENST00000443896 PSMA5P28066 241 aa19.41■□□□□ 0.7
PIKFYVE-206ENST00000443896 RNF20Q5VTR2 975 aa19.41■□□□□ 0.7
PIKFYVE-206ENST00000443896 GPR108Q9NPR9 543 aa19.41■□□□□ 0.7
PIKFYVE-206ENST00000443896 TAF5LO75529 589 aa19.4■□□□□ 0.7
PIKFYVE-206ENST00000443896 TSGA10IPQ3SY00 556 aa19.4■□□□□ 0.7
PIKFYVE-206ENST00000443896 ISCA1Q9BUE6 129 aa19.4■□□□□ 0.7
PIKFYVE-206ENST00000443896 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
PIKFYVE-206ENST00000443896 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
PIKFYVE-206ENST00000443896 HMG20BQ9P0W2 317 aa19.4■□□□□ 0.7
PIKFYVE-206ENST00000443896 GTF2E1P29083 439 aaPredicted RBP19.39■□□□□ 0.69
PIKFYVE-206ENST00000443896 IL15P40933 162 aaPredicted RBP19.39■□□□□ 0.69
PIKFYVE-206ENST00000443896 USPL1Q5W0Q7 1092 aa19.39■□□□□ 0.69
PIKFYVE-206ENST00000443896 RBM27Q9P2N5 1060 aaKnown RBP19.39■□□□□ 0.69
PIKFYVE-206ENST00000443896 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
PIKFYVE-206ENST00000443896 TMEM63CQ9P1W3 806 aa19.39■□□□□ 0.69
PIKFYVE-206ENST00000443896 ZSCAN22P10073 491 aaPredicted RBP19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 SYT1P21579 422 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 STX6O43752 255 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 TCIRG1Q13488 830 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 CCDC83Q8IWF9 413 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 PIGBQ92521 554 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 DNAJC2Q99543 621 aaKnown RBP19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 ALDH8A1Q9H2A2 487 aaPredicted RBP19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 ZNF609O15014 1411 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 BTG4Q9NY30 223 aa19.38■□□□□ 0.69
PIKFYVE-206ENST00000443896 CIAO1O76071 339 aa19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 ST3GAL1Q11201 340 aa19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 ME3Q16798 604 aa19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 SMAP1Q8IYB5 467 aaPredicted RBP19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 ASAP1Q9ULH1 1129 aa19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 EYA2O00167 538 aa19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 TRIM28Q13263 835 aaKnown RBP19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
PIKFYVE-206ENST00000443896 CCDC173Q0VFZ6 552 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 TMEM87AQ8NBN3 555 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 TPCN1Q9ULQ1 816 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 DISP2A7MBM2 1401 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 ZBTB22O15209 634 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 BLOC1S2Q6QNY1 142 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 KBTBD3Q8NAB2 608 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 TAF6LQ9Y6J9 622 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 PALLDQ8WX93 1383 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 RPS6KB1P23443 525 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 COL9A3Q14050 684 aaPredicted RBP19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 TICAM2Q86XR7 235 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 DNAJC10Q8IXB1 793 aa19.36■□□□□ 0.69
PIKFYVE-206ENST00000443896 GJB2P29033 226 aa19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 LRRC24Q50LG9 513 aa19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 ANKRD1Q15327 319 aa19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 MCMDC2Q4G0Z9 681 aa19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 COL14A1Q05707 1796 aaKnown RBP19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 DDX46Q7L014 1031 aaKnown RBP19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 ZNF594Q96JF6 807 aaPredicted RBP19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 NEUROD6Q96NK8 337 aa19.35■□□□□ 0.69
PIKFYVE-206ENST00000443896 ITGB4P16144 1822 aa19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 SH3TC1Q8TE82 1336 aa19.34■□□□□ 0.69
PIKFYVE-206ENST00000443896 F13A1P00488 732 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms