RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 RTL1A6NKG5 1358 aa10.41□□□□□ -0.74
SSXP3-201ENST00000442971 FOXK2Q01167 660 aa10.41□□□□□ -0.74
SSXP3-201ENST00000442971 CXCL9Q07325 125 aa10.41□□□□□ -0.74
SSXP3-201ENST00000442971 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
SSXP3-201ENST00000442971 KDM3BQ7LBC6 1761 aa10.41□□□□□ -0.74
SSXP3-201ENST00000442971 BAHCC1Q9P281 2608 aa10.41□□□□□ -0.74
SSXP3-201ENST00000442971 DCPSQ96C86 337 aaKnown RBP10.4□□□□□ -0.74
SSXP3-201ENST00000442971 CDX2Q99626 313 aaPredicted RBP10.4□□□□□ -0.74
SSXP3-201ENST00000442971 LRFN3Q9BTN0 628 aa10.4□□□□□ -0.74
SSXP3-201ENST00000442971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.74
SSXP3-201ENST00000442971 CNOT7Q9UIV1 285 aaKnown RBP10.4□□□□□ -0.74
SSXP3-201ENST00000442971 PTCH2Q9Y6C5 1203 aa10.4□□□□□ -0.74
SSXP3-201ENST00000442971 TONSLQ96HA7 1378 aa10.4□□□□□ -0.75
SSXP3-201ENST00000442971 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
SSXP3-201ENST00000442971 H7C1D1 291 aa10.39□□□□□ -0.75
SSXP3-201ENST00000442971 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
SSXP3-201ENST00000442971 FKBP1BP68106 108 aa10.39□□□□□ -0.75
SSXP3-201ENST00000442971 MKRN3Q13064 507 aaKnown RBP10.39□□□□□ -0.75
SSXP3-201ENST00000442971 CAP1Q01518 475 aa10.38□□□□□ -0.75
SSXP3-201ENST00000442971 DNAJC10Q8IXB1 793 aa10.38□□□□□ -0.75
SSXP3-201ENST00000442971 SPDYE1Q8NFV5 336 aaPredicted RBP10.38□□□□□ -0.75
SSXP3-201ENST00000442971 NKX2-3Q8TAU0 364 aa10.38□□□□□ -0.75
SSXP3-201ENST00000442971 CDCA5Q96FF9 252 aa10.38□□□□□ -0.75
SSXP3-201ENST00000442971 A0A1W2PP64 1363 aa10.38□□□□□ -0.75
SSXP3-201ENST00000442971 SH3TC2Q8TF17 1288 aa10.37□□□□□ -0.75
SSXP3-201ENST00000442971 EDC4Q6P2E9 1401 aaKnown RBP10.37□□□□□ -0.75
SSXP3-201ENST00000442971 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
SSXP3-201ENST00000442971 ZNF697Q5TEC3 545 aa10.36□□□□□ -0.75
SSXP3-201ENST00000442971 CC2D2BQ6DHV5 1058 aa10.36□□□□□ -0.75
SSXP3-201ENST00000442971 SULF1Q8IWU6 871 aa10.36□□□□□ -0.75
SSXP3-201ENST00000442971 ZNRF3Q9ULT6 936 aa10.36□□□□□ -0.75
SSXP3-201ENST00000442971 ZBTB1Q9Y2K1 713 aa10.36□□□□□ -0.75
SSXP3-201ENST00000442971 KLRG2A4D1S0 409 aaPredicted RBP10.35□□□□□ -0.75
SSXP3-201ENST00000442971 UBE2Q2LH0YL09 131 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 PPIP5K2O43314 1243 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 CYP19A1P11511 503 aaPredicted RBP10.35□□□□□ -0.75
SSXP3-201ENST00000442971 CABP4P57796 275 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 SP3Q02447 781 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 RRS1Q15050 365 aaKnown RBP10.35□□□□□ -0.75
SSXP3-201ENST00000442971 HSP90AB2PQ58FF8 381 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 MOB2Q70IA6 237 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 MICALL2Q8IY33 904 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 SETDB2Q96T68 719 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 CACNA1BQ00975 2339 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 ZNF646O15015 1829 aaPredicted RBP10.35□□□□□ -0.75
SSXP3-201ENST00000442971 WASHC2AQ641Q2 1341 aa10.35□□□□□ -0.75
SSXP3-201ENST00000442971 FARP2O94887 1054 aaPredicted RBP10.34□□□□□ -0.75
SSXP3-201ENST00000442971 GJA8P48165 433 aa10.34□□□□□ -0.75
SSXP3-201ENST00000442971 TNIP1Q15025 636 aa10.34□□□□□ -0.75
SSXP3-201ENST00000442971 TBC1D10BQ4KMP7 808 aaPredicted RBP10.34□□□□□ -0.75
SSXP3-201ENST00000442971 COG3Q96JB2 828 aa10.34□□□□□ -0.75
SSXP3-201ENST00000442971 UHRF1Q96T88 793 aaPredicted RBP10.34□□□□□ -0.75
SSXP3-201ENST00000442971 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
SSXP3-201ENST00000442971 MTFR1Q15390 333 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 AOC3Q16853 763 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 HDGFL2Q7Z4V5 671 aaPredicted RBP10.33□□□□□ -0.76
SSXP3-201ENST00000442971 IFNL1Q8IU54 200 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 MYLIPQ8WY64 445 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 UBE2OQ9C0C9 1292 aaKnown RBP10.33□□□□□ -0.76
SSXP3-201ENST00000442971 RAD17O75943 681 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 EGFRP00533 1210 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 MAGEA10P43363 369 aaPredicted RBP10.33□□□□□ -0.76
SSXP3-201ENST00000442971 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.76
SSXP3-201ENST00000442971 ARHGEF6Q15052 776 aa10.33□□□□□ -0.76
SSXP3-201ENST00000442971 CDH23Q9H251 3354 aa10.32□□□□□ -0.76
SSXP3-201ENST00000442971 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
SSXP3-201ENST00000442971 A0A087WZG4 1122 aa10.32□□□□□ -0.76
SSXP3-201ENST00000442971 GJB1P08034 283 aa10.32□□□□□ -0.76
SSXP3-201ENST00000442971 FOSL2P15408 326 aa10.32□□□□□ -0.76
SSXP3-201ENST00000442971 INHBEP58166 350 aa10.32□□□□□ -0.76
SSXP3-201ENST00000442971 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
SSXP3-201ENST00000442971 ZMYND8Q9ULU4 1186 aaPredicted RBP10.32□□□□□ -0.76
SSXP3-201ENST00000442971 NCAPD2Q15021 1401 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 ALPK3Q96L96 1907 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 HSP90AB1P08238 724 aaKnown RBP10.31□□□□□ -0.76
SSXP3-201ENST00000442971 CANXP27824 592 aaKnown RBP10.31□□□□□ -0.76
SSXP3-201ENST00000442971 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 CRHR2Q13324 411 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 TMEM31Q5JXX7 168 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
SSXP3-201ENST00000442971 VPS33BQ9H267 617 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 CHD8Q9HCK8 2581 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
SSXP3-201ENST00000442971 KIF7Q2M1P5 1343 aa10.3□□□□□ -0.76
SSXP3-201ENST00000442971 PRAMEF22A3QJZ6 481 aa10.3□□□□□ -0.76
SSXP3-201ENST00000442971 RGL2O15211 777 aa10.3□□□□□ -0.76
SSXP3-201ENST00000442971 EIF5P55010 431 aaKnown RBP10.3□□□□□ -0.76
SSXP3-201ENST00000442971 NFATC2IPQ8NCF5 419 aa10.3□□□□□ -0.76
SSXP3-201ENST00000442971 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
SSXP3-201ENST00000442971 DPF2Q92785 391 aa10.3□□□□□ -0.76
SSXP3-201ENST00000442971 MANSC4A6NHS7 340 aaPredicted RBP10.29□□□□□ -0.76
SSXP3-201ENST00000442971 IGF2BP3O00425 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
SSXP3-201ENST00000442971 TCIRG1Q13488 830 aa10.29□□□□□ -0.76
SSXP3-201ENST00000442971 NBPF5PQ86XG9 351 aaPredicted RBP10.29□□□□□ -0.76
SSXP3-201ENST00000442971 C7orf61Q8IZ16 206 aa10.29□□□□□ -0.76
SSXP3-201ENST00000442971 USP38Q8NB14 1042 aa10.29□□□□□ -0.76
SSXP3-201ENST00000442971 ASB2Q96Q27 587 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms