RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 LDHAL6AQ6ZMR3 332 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 RTKN2Q8IZC4 609 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 TSPYL6Q8N831 410 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 SLC4A9Q96Q91 983 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 CHAF1AQ13111 956 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 G3BP1Q13283 466 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 CACNA1FO60840 1977 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 KIF16BQ96L93 1317 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 CLEC17AQ6ZS10 378 aa9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 NOL10Q9BSC4 688 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-208ENST00000442054 UFL1O94874 794 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 PROSER3Q2NL68 480 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 COL22A1Q8NFW1 1626 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 H7C1D1 291 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 PPEF1O14829 653 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 CWF19L2Q2TBE0 894 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 BMP2KLQ5H9B9 411 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 METTL24Q5JXM2 366 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 PRPF40BQ6NWY9 871 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 SIL1Q9H173 461 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 CD2BP2O95400 341 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 RPS8P62241 208 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 SUSD4Q5VX71 490 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 ALS2Q96Q42 1657 aa9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
CDC42BPA-208ENST00000442054 CCDC191Q8NCU4 936 aa9.02□□□□□ -0.96
CDC42BPA-208ENST00000442054 C22orf23Q9BZE7 217 aa9.02□□□□□ -0.96
CDC42BPA-208ENST00000442054 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 ZNF277Q9NRM2 450 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 GNL3LQ9NVN8 582 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 HMMRO75330 724 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 GGA1Q9UJY5 639 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 KDM6AO15550 1401 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 NWD2Q9ULI1 1742 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 AK9Q5TCS8 1911 aa9.02□□□□□ -0.97
CDC42BPA-208ENST00000442054 PDE8AO60658 829 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 BBOX1O75936 387 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 CAMTA2O94983 1202 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 GNAI3P08754 354 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 LMNB1P20700 586 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 LINS1Q8NG48 757 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 TMOD2Q9NZR1 351 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 MCM4P33991 863 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 DDR1Q08345 913 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 WASHC4Q2M389 1173 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 CAVIN4Q5BKX8 364 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 CHD1LQ86WJ1 897 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 HOMEZQ8IX15 550 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 METTL22Q9BUU2 404 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 KDM3BQ7LBC6 1761 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 FAM43AQ8N2R8 423 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 TRIM34Q9BYJ4 488 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 HDAC9Q9UKV0 1011 aa9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 ISY1Q9ULR0 285 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 TRPM3Q9HCF6 1732 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-208ENST00000442054 F8W031 263 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 GSPT1P15170 499 aaKnown RBP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 CCT4P50991 539 aaKnown RBP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 LMBR1LQ6UX01 489 aa9□□□□□ -0.97
CDC42BPA-208ENST00000442054 PODXL2Q9NZ53 605 aa9□□□□□ -0.97
CDC42BPA-208ENST00000442054 IQCA1LA6NCM1 817 aa9□□□□□ -0.97
CDC42BPA-208ENST00000442054 POLRMTO00411 1230 aaKnown RBP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 NLRP10Q86W26 655 aa9□□□□□ -0.97
CDC42BPA-208ENST00000442054 SYNE4Q8N205 404 aa9□□□□□ -0.97
CDC42BPA-208ENST00000442054 HELBQ8NG08 1087 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 XRCC6P12956 609 aaKnown RBP eCLIP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 RRAGDQ9NQL2 400 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-208ENST00000442054 RAD17O75943 681 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 NF2P35240 595 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 RASSF7Q02833 373 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 BECN1Q14457 450 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 DOK7Q18PE1 504 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 ABT1Q9ULW3 272 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 MYO1BO43795 1136 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 VEGFAP15692 232 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 TNIP1Q15025 636 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 INTS3Q68E01 1043 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 G2E3Q7L622 706 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 SALL3Q9BXA9 1300 aa8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-208ENST00000442054 GRM8O00222 908 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 PTGER2P43116 358 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 IL17RAQ96F46 866 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 RRAGCQ9HB90 399 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 ADAMTS7Q9UKP4 1686 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 RAB3GAP1Q15042 981 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 ZSCAN29Q8IWY8 852 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 ZBTB38Q8NAP3 1195 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 ANKRD2Q9GZV1 360 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 SLKQ9H2G2 1235 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 GCC1Q96CN9 775 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 ABCF2Q9UG63 623 aa8.98□□□□□ -0.97
CDC42BPA-208ENST00000442054 SURF6O75683 361 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms