RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 RETREG3Q86VR2 466 aa9.33□□□□□ -0.92
UBE2D4-203ENST00000440652 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
UBE2D4-203ENST00000440652 SLC12A5Q9H2X9 1139 aa9.33□□□□□ -0.92
UBE2D4-203ENST00000440652 KIAA1551Q9HCM1 1747 aa9.33□□□□□ -0.92
UBE2D4-203ENST00000440652 JUNDP17535 347 aa9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 NDUFV2P19404 249 aa9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 HOXC9P31274 260 aa9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 COL13A1Q5TAT6 717 aaPredicted RBP9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 IP6K1Q92551 441 aa9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 NMRK2Q9NPI5 230 aa9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 PXDNLA1KZ92 1463 aa9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 N4BP2Q86UW6 1770 aaPredicted RBP9.32□□□□□ -0.92
UBE2D4-203ENST00000440652 AMPHP49418 695 aa9.31□□□□□ -0.92
UBE2D4-203ENST00000440652 TMF1P82094 1093 aa9.31□□□□□ -0.92
UBE2D4-203ENST00000440652 MPRIPQ6WCQ1 1025 aa9.31□□□□□ -0.92
UBE2D4-203ENST00000440652 HDGFL2Q7Z4V5 671 aaPredicted RBP9.31□□□□□ -0.92
UBE2D4-203ENST00000440652 TOR4AQ9NXH8 423 aa9.31□□□□□ -0.92
UBE2D4-203ENST00000440652 GJA5P36382 358 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 FOXC1Q12948 553 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 TRIM32Q13049 653 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 RRS1Q15050 365 aaKnown RBP9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 NBPF6Q5VWK0 638 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 NBPF4Q96M43 638 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 ITGB4P16144 1822 aa9.3□□□□□ -0.92
UBE2D4-203ENST00000440652 FAM187AA6NFU0 413 aa9.29□□□□□ -0.92
UBE2D4-203ENST00000440652 ZBTB24O43167 697 aaPredicted RBP9.29□□□□□ -0.92
UBE2D4-203ENST00000440652 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
UBE2D4-203ENST00000440652 DNAJC5GQ8N7S2 189 aa9.29□□□□□ -0.92
UBE2D4-203ENST00000440652 PKD1L3Q7Z443 1732 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 PDE4DQ08499 809 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 LINC00116Q8NCU8 138 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 COG3Q96JB2 828 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 BCS1LQ9Y276 419 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 SMG6Q86US8 1419 aaKnown RBP9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 PCDH11XQ9BZA7 1347 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 PCDH11YQ9BZA8 1340 aa9.28□□□□□ -0.92
UBE2D4-203ENST00000440652 RTL1A6NKG5 1358 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 KCPQ6ZWJ8 1503 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 C6orf229H3BNL8 230 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 WNT7AO00755 349 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 TOMM70O94826 608 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 MMP10P09238 476 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 RAPGEF4Q8WZA2 1011 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
UBE2D4-203ENST00000440652 KIF13BQ9NQT8 1826 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 C10orf71Q711Q0 1435 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 A0A0G2JLW4 131 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 SPTLC1O15269 473 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 CYP27B1O15528 508 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 TATP17735 454 aaPredicted RBP9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 TNS4Q8IZW8 715 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 FLAD1Q8NFF5 587 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 TESK2Q96S53 571 aa9.26□□□□□ -0.93
UBE2D4-203ENST00000440652 NSD3Q9BZ95 1437 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 ITPK1Q13572 414 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 DIXDC1Q155Q3 683 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 ARHGAP27Q6ZUM4 889 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 ERICH6Q7L0X2 663 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 KLRG1Q96E93 195 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 BRCA1P38398 1863 aaKnown RBP9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 C4AP0C0L4 1744 aa9.25□□□□□ -0.93
UBE2D4-203ENST00000440652 KIF20BQ96Q89 1820 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 PCNTO95613 3336 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 SSFA2P28290 1259 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 SKOR1P84550 965 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 HSP90AB2PQ58FF8 381 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 PIGBQ92521 554 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 NUDT12Q9BQG2 462 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 PCDHB15Q9Y5E8 787 aa9.24□□□□□ -0.93
UBE2D4-203ENST00000440652 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 SPDYE5A6NIY4 337 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 AVPP01185 164 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 DPEP1P16444 411 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 SIK1P57059 783 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 MTMR2Q13614 643 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 RALBP1Q15311 655 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 C9orf131Q5VYM1 1079 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 C16orf71Q8IYS4 520 aaPredicted RBP9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 MRS2Q9HD23 443 aa9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 TNRC6CQ9HCJ0 1690 aaKnown RBP9.23□□□□□ -0.93
UBE2D4-203ENST00000440652 WNT7BP56706 349 aa9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 PTPRNQ16849 979 aa9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 CRIPAKQ8N1N5 446 aa9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 MRGPRX2Q96LB1 330 aa9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
UBE2D4-203ENST00000440652 ASAP1Q9ULH1 1129 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms