RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 PIF1Q9H611 641 aa6.72□□□□□ -1.33
NUDCD1-202ENST00000427660 ZFAND3Q9H8U3 227 aa6.72□□□□□ -1.33
NUDCD1-202ENST00000427660 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
NUDCD1-202ENST00000427660 KCNMB2Q9Y691 235 aa6.72□□□□□ -1.33
NUDCD1-202ENST00000427660 EPB42P16452 691 aa6.71□□□□□ -1.34
NUDCD1-202ENST00000427660 GSTT1P30711 240 aa6.71□□□□□ -1.34
NUDCD1-202ENST00000427660 PWP1Q13610 501 aa6.71□□□□□ -1.34
NUDCD1-202ENST00000427660 NXPE4Q6UWF7 544 aa6.71□□□□□ -1.34
NUDCD1-202ENST00000427660 MEIOBQ8N635 442 aa6.71□□□□□ -1.34
NUDCD1-202ENST00000427660 RSRP1Q9BUV0 290 aa6.71□□□□□ -1.34
NUDCD1-202ENST00000427660 SUV39H2Q9H5I1 410 aa6.71□□□□□ -1.34
NUDCD1-202ENST00000427660 NFE2L2Q16236 605 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 CMTR1Q8N1G2 835 aaKnown RBP6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 HSH2DQ96JZ2 352 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 EGFRP00533 1210 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 EGFLAMQ63HQ2 1017 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 ZNF746Q6NUN9 644 aaPredicted RBP6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 BICDL1Q6ZP65 573 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 ANKRD24Q8TF21 1146 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 TSEN34Q9BSV6 310 aaKnown RBP6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 NEUROD4Q9HD90 331 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 TMEM63CQ9P1W3 806 aa6.7□□□□□ -1.34
NUDCD1-202ENST00000427660 GADD45BO75293 160 aaPredicted RBP6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 ZNF598Q86UK7 904 aaKnown RBP6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 CKAP2LQ8IYA6 745 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 TRAK1Q9UPV9 953 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 SPINT1O43278 529 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 ATP4AP20648 1035 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 SPON2Q9BUD6 331 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 CHRDQ9H2X0 955 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 KBTBD4Q9NVX7 518 aa6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 ABI2Q9NYB9 513 aaPredicted RBP6.69□□□□□ -1.34
NUDCD1-202ENST00000427660 VEGFBP49765 207 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 GRM2Q14416 872 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 ZNF697Q5TEC3 545 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 KIAA0319Q5VV43 1072 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 KLRG1Q96E93 195 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 ZIC5Q96T25 663 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 PKD2L1Q9P0L9 805 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 PPM1HQ9ULR3 514 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 USP20Q9Y2K6 914 aa6.68□□□□□ -1.34
NUDCD1-202ENST00000427660 RLBP1P12271 317 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 KIAA0825Q8IV33 1275 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 MKL1Q969V6 931 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 SBNO2Q9Y2G9 1366 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 EREGO14944 169 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 XYLBO75191 536 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 TYRO3Q06418 890 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 NLRP13Q86W25 1043 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 NLGN1Q8N2Q7 840 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 C1orf127Q8N9H9 656 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 INSM2Q96T92 566 aaPredicted RBP6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 STRIP2Q9ULQ0 834 aa6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 TTF2Q9UNY4 1162 aaKnown RBP6.67□□□□□ -1.34
NUDCD1-202ENST00000427660 A0A1B0GTH6 734 aa6.66□□□□□ -1.34
NUDCD1-202ENST00000427660 POLR3DP05423 398 aaPredicted RBP6.66□□□□□ -1.34
NUDCD1-202ENST00000427660 XRCC5P13010 732 aaKnown RBP6.66□□□□□ -1.34
NUDCD1-202ENST00000427660 PHKA2P46019 1235 aa6.66□□□□□ -1.34
NUDCD1-202ENST00000427660 RELL1Q8IUW5 271 aa6.66□□□□□ -1.34
NUDCD1-202ENST00000427660 C3orf58Q8NDZ4 430 aa6.66□□□□□ -1.34
NUDCD1-202ENST00000427660 SSBP05455 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 CES1P23141 567 aa6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 SERINC3Q13530 473 aa6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 COL9A2Q14055 689 aaPredicted RBP6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 BMS1Q14692 1282 aaKnown RBP6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 ARSJQ5FYB0 599 aaPredicted RBP6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 PRPF40BQ6NWY9 871 aaKnown RBP6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 LRRC69Q6ZNQ3 347 aa6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 MRFAP1L1Q96HT8 127 aa6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 POLMQ9NP87 494 aaPredicted RBP6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 CNTN3Q9P232 1028 aa6.65□□□□□ -1.34
NUDCD1-202ENST00000427660 EDN3P14138 238 aa6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 GRNP28799 593 aaKnown RBP6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 FOXC1Q12948 553 aa6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 IFFO2Q5TF58 517 aa6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 GLIS3Q8NEA6 775 aa6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 TMEM74Q96NL1 305 aa6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.65□□□□□ -1.35
NUDCD1-202ENST00000427660 TTC24A2A3L6 582 aaPredicted RBP6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 J3QL48 77 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 HSD3B2P26439 372 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 CCDC85BQ15834 202 aaPredicted RBP6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 TTC39BQ5VTQ0 682 aaPredicted RBP6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 KCNQ5Q9NR82 932 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 ADAMTS1Q9UHI8 967 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 K7ELQ4 463 aaPredicted RBP6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 CLSTN1O94985 981 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 UPP2O95045 317 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 EIF4A3P38919 411 aaKnown RBP6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 POU4F2Q12837 409 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 JAZF1Q86VZ6 243 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 CYP4X1Q8N118 509 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 CEP63Q96MT8 703 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 EHD4Q9H223 541 aa6.64□□□□□ -1.35
NUDCD1-202ENST00000427660 ZFYVE1Q9HBF4 777 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms