RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 ATAD2Q6PL18 1390 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 A0A1B0GVG6 124 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 SNUPNO95149 360 aaKnown RBP7.91□□□□□ -1.14
CNOT4-205ENST00000423368 FAM163BP0C2L3 166 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 CPA1P15085 419 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 FOSBP53539 338 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 EXOSC9Q06265 439 aaKnown RBP7.91□□□□□ -1.14
CNOT4-205ENST00000423368 TCP11L2Q8N4U5 519 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 SSH1Q8WYL5 1049 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 BLMP54132 1417 aaPredicted RBP7.91□□□□□ -1.14
CNOT4-205ENST00000423368 SOS1Q07889 1333 aaPredicted RBP7.91□□□□□ -1.14
CNOT4-205ENST00000423368 NRDCO43847 1150 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 PPFIA4O75335 1185 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 A1BGP04217 495 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 MYL6BP14649 208 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 EIF5P55010 431 aaKnown RBP7.91□□□□□ -1.14
CNOT4-205ENST00000423368 E4F1Q66K89 784 aaPredicted RBP7.91□□□□□ -1.14
CNOT4-205ENST00000423368 ARMC9Q7Z3E5 817 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 BICD2Q8TD16 824 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 BCAS4Q8TDM0 211 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 MAF1Q9H063 256 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 TPCN1Q9ULQ1 816 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 DDX19BQ9UMR2 479 aa7.91□□□□□ -1.14
CNOT4-205ENST00000423368 TPP2P29144 1249 aaPredicted RBP7.9□□□□□ -1.14
CNOT4-205ENST00000423368 GNG11P61952 73 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 CEP85LQ5SZL2 805 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 TMC6Q7Z403 805 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 GPIHBP1Q8IV16 184 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 DDX11Q96FC9 970 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 MYO1BO43795 1136 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 MTA1Q13330 715 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 SMARCC1Q92922 1105 aaPredicted RBP7.9□□□□□ -1.14
CNOT4-205ENST00000423368 TSGA10Q9BZW7 698 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 RTEL1Q9NZ71 1219 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 MKRN1Q9UHC7 482 aaKnown RBP7.9□□□□□ -1.14
CNOT4-205ENST00000423368 MCM8Q9UJA3 840 aa7.9□□□□□ -1.14
CNOT4-205ENST00000423368 THOC2Q8NI27 1593 aaKnown RBP7.9□□□□□ -1.15
CNOT4-205ENST00000423368 WDR33Q9C0J8 1336 aaKnown RBP7.9□□□□□ -1.15
CNOT4-205ENST00000423368 FGD6Q6ZV73 1430 aa7.9□□□□□ -1.15
CNOT4-205ENST00000423368 CCP110O43303 1012 aa7.9□□□□□ -1.15
CNOT4-205ENST00000423368 PPFIA3O75145 1194 aa7.9□□□□□ -1.15
CNOT4-205ENST00000423368 TADA3O75528 432 aa7.9□□□□□ -1.15
CNOT4-205ENST00000423368 MNX1P50219 401 aaPredicted RBP7.9□□□□□ -1.15
CNOT4-205ENST00000423368 HDGFP51858 240 aaKnown RBP7.9□□□□□ -1.15
CNOT4-205ENST00000423368 CDR1P51861 262 aa7.9□□□□□ -1.15
CNOT4-205ENST00000423368 MECOMQ03112 1051 aa7.9□□□□□ -1.15
CNOT4-205ENST00000423368 SAAL1Q96ER3 474 aa7.9□□□□□ -1.15
CNOT4-205ENST00000423368 VIRMAQ69YN4 1812 aaKnown RBP7.89□□□□□ -1.15
CNOT4-205ENST00000423368 ZEB2O60315 1214 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 KIAA0754O94854 1291 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 CCZ1BP86790 482 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 CCZ1P86791 482 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-205ENST00000423368 TRAF1Q13077 416 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 KARSQ15046 597 aaKnown RBP7.89□□□□□ -1.15
CNOT4-205ENST00000423368 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-205ENST00000423368 MAEAQ7L5Y9 396 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 UTP14AQ9BVJ6 771 aaKnown RBP7.89□□□□□ -1.15
CNOT4-205ENST00000423368 MIA2Q96PC5 1412 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 TCHHQ07283 1943 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 GNAI3P08754 354 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 NBPF7P0C2Y1 421 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-205ENST00000423368 USP5P45974 858 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 LAMB3Q13751 1172 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 FUCA2Q9BTY2 467 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 IRX2Q9BZI1 471 aaPredicted RBP7.89□□□□□ -1.15
CNOT4-205ENST00000423368 ABCB6Q9NP58 842 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 NCKAP5LQ9HCH0 1330 aa7.89□□□□□ -1.15
CNOT4-205ENST00000423368 CAMSAP2Q08AD1 1489 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 CARMIL1Q5VZK9 1371 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 ANKRD30BQ9BXX2 1392 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 RNF40O75150 1001 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 MLLT3P42568 568 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 HDAC1Q13547 482 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 B4GALNT2Q8NHY0 566 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 RILPL2Q969X0 211 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 FAM167BQ9BTA0 163 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 PHACTR1Q9C0D0 580 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 CHCHD3Q9NX63 227 aaKnown RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 SCAPERQ9BY12 1400 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 DENND4BO75064 1496 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 CHUKO15111 745 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 FANCGO15287 622 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 SDSP20132 328 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 SYT1P21579 422 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 IGBP1P78318 339 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 INTS3Q68E01 1043 aaKnown RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 RINLQ6ZS11 566 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 TACO1Q9BSH4 297 aaKnown RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 BSDC1Q9NW68 430 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 DDX20Q9UHI6 824 aaKnown RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 ZNF777Q9ULD5 760 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 TMCO5BA8MYB1 307 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 COQ9O75208 318 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 ERCC3P19447 782 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 SFPQP23246 707 aaKnown RBP eCLIP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 C11orf57Q6ZUT1 292 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-205ENST00000423368 PLA2G4DQ86XP0 818 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 USHBP1Q8N6Y0 703 aa7.88□□□□□ -1.15
CNOT4-205ENST00000423368 IQUBQ8NA54 791 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms