RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 RTFDC1Q9BY42 306 aaPredicted RBP23.97■■□□□ 1.43
SREBF1-206ENST00000423161 SCNN1DP51172 638 aa23.96■■□□□ 1.43
SREBF1-206ENST00000423161 MAP1SQ66K74 1059 aaPredicted RBP23.96■■□□□ 1.43
SREBF1-206ENST00000423161 FAM89AQ96GI7 184 aa23.96■■□□□ 1.43
SREBF1-206ENST00000423161 CNTNAP1P78357 1384 aa23.95■■□□□ 1.42
SREBF1-206ENST00000423161 TMEM88BA6NKF7 163 aa23.95■■□□□ 1.42
SREBF1-206ENST00000423161 EPS15P42566 896 aa23.95■■□□□ 1.42
SREBF1-206ENST00000423161 COL13A1Q5TAT6 717 aaPredicted RBP23.95■■□□□ 1.42
SREBF1-206ENST00000423161 CNTROBQ8N137 903 aa23.95■■□□□ 1.42
SREBF1-206ENST00000423161 DUOX1Q9NRD9 1551 aa23.95■■□□□ 1.42
SREBF1-206ENST00000423161 TRPM7Q96QT4 1865 aa23.94■■□□□ 1.42
SREBF1-206ENST00000423161 ELL2O00472 640 aaPredicted RBP23.94■■□□□ 1.42
SREBF1-206ENST00000423161 GOLGA2Q08379 1002 aa23.93■■□□□ 1.42
SREBF1-206ENST00000423161 RTL5Q5HYW3 569 aaPredicted RBP23.93■■□□□ 1.42
SREBF1-206ENST00000423161 TMC4Q7Z404 712 aa23.93■■□□□ 1.42
SREBF1-206ENST00000423161 RIC3Q7Z5B4 369 aa23.93■■□□□ 1.42
SREBF1-206ENST00000423161 ZNRF3Q9ULT6 936 aa23.93■■□□□ 1.42
SREBF1-206ENST00000423161 KIAA2012Q0VF49 1180 aa23.92■■□□□ 1.42
SREBF1-206ENST00000423161 PHAXQ9H814 394 aaKnown RBP23.92■■□□□ 1.42
SREBF1-206ENST00000423161 COL4A1P02462 1669 aa23.92■■□□□ 1.42
SREBF1-206ENST00000423161 CXCL9Q07325 125 aa23.91■■□□□ 1.42
SREBF1-206ENST00000423161 TRIM28Q13263 835 aaKnown RBP23.91■■□□□ 1.42
SREBF1-206ENST00000423161 SF3B3Q15393 1217 aaKnown RBP23.91■■□□□ 1.42
SREBF1-206ENST00000423161 USP50Q70EL3 339 aaPredicted RBP23.9■■□□□ 1.42
SREBF1-206ENST00000423161 C8orf58Q8NAV2 365 aa23.9■■□□□ 1.42
SREBF1-206ENST00000423161 IRS4O14654 1257 aaPredicted RBP23.89■■□□□ 1.41
SREBF1-206ENST00000423161 CELF1Q92879 486 aaKnown RBP23.89■■□□□ 1.41
SREBF1-206ENST00000423161 GPRC5DQ9NZD1 345 aa23.89■■□□□ 1.41
SREBF1-206ENST00000423161 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
SREBF1-206ENST00000423161 CIAPIN1Q6FI81 312 aa23.88■■□□□ 1.41
SREBF1-206ENST00000423161 MYD88Q99836 296 aa23.88■■□□□ 1.41
SREBF1-206ENST00000423161 VEGFBP49765 207 aa23.87■■□□□ 1.41
SREBF1-206ENST00000423161 GMPSP49915 693 aaPredicted RBP23.87■■□□□ 1.41
SREBF1-206ENST00000423161 ADARB2Q9NS39 739 aaKnown RBP23.87■■□□□ 1.41
SREBF1-206ENST00000423161 RAD17O75943 681 aa23.86■■□□□ 1.41
SREBF1-206ENST00000423161 CCDC30Q5VVM6 783 aa23.86■■□□□ 1.41
SREBF1-206ENST00000423161 ZBTB38Q8NAP3 1195 aaPredicted RBP23.86■■□□□ 1.41
SREBF1-206ENST00000423161 CHMP4AQ9BY43 222 aa23.86■■□□□ 1.41
SREBF1-206ENST00000423161 MYH3P11055 1940 aa23.85■■□□□ 1.41
SREBF1-206ENST00000423161 TNIP1Q15025 636 aa23.85■■□□□ 1.41
SREBF1-206ENST00000423161 TNS4Q8IZW8 715 aa23.85■■□□□ 1.41
SREBF1-206ENST00000423161 NSFL1CQ9UNZ2 370 aaKnown RBP23.85■■□□□ 1.41
SREBF1-206ENST00000423161 CDHR2Q9BYE9 1310 aa23.84■■□□□ 1.41
SREBF1-206ENST00000423161 RASSF10A6NK89 507 aa23.84■■□□□ 1.41
SREBF1-206ENST00000423161 YDJCA8MPS7 323 aa23.84■■□□□ 1.41
SREBF1-206ENST00000423161 DDX58O95786 925 aaKnown RBP23.84■■□□□ 1.41
SREBF1-206ENST00000423161 TSPYL6Q8N831 410 aa23.84■■□□□ 1.41
SREBF1-206ENST00000423161 CCDC191Q8NCU4 936 aa23.84■■□□□ 1.41
SREBF1-206ENST00000423161 BCL2L13Q9BXK5 485 aa23.84■■□□□ 1.41
SREBF1-206ENST00000423161 HSP90B1P14625 803 aaKnown RBP23.83■■□□□ 1.41
SREBF1-206ENST00000423161 FMR1Q06787 632 aaKnown RBP eCLIP23.83■■□□□ 1.41
SREBF1-206ENST00000423161 WASHC4Q2M389 1173 aa23.83■■□□□ 1.41
SREBF1-206ENST00000423161 DEFB115Q30KQ5 88 aa23.83■■□□□ 1.41
SREBF1-206ENST00000423161 TSR2Q969E8 191 aaKnown RBP23.83■■□□□ 1.41
SREBF1-206ENST00000423161 ABT1Q9ULW3 272 aaKnown RBP23.83■■□□□ 1.41
SREBF1-206ENST00000423161 C6orf229H3BNL8 230 aa23.82■■□□□ 1.4
SREBF1-206ENST00000423161 PCCAP05165 728 aaPredicted RBP23.82■■□□□ 1.4
SREBF1-206ENST00000423161 RPS8P62241 208 aaKnown RBP23.82■■□□□ 1.4
SREBF1-206ENST00000423161 GPSM2P81274 684 aa23.82■■□□□ 1.4
SREBF1-206ENST00000423161 METTL22Q9BUU2 404 aaPredicted RBP23.82■■□□□ 1.4
SREBF1-206ENST00000423161 CWC25Q9NXE8 425 aaPredicted RBP23.82■■□□□ 1.4
SREBF1-206ENST00000423161 TRAF5O00463 557 aa23.81■■□□□ 1.4
SREBF1-206ENST00000423161 CCDC27Q2M243 656 aa23.81■■□□□ 1.4
SREBF1-206ENST00000423161 POLLQ9UGP5 575 aa23.81■■□□□ 1.4
SREBF1-206ENST00000423161 SPEF2Q9C093 1822 aa23.81■■□□□ 1.4
SREBF1-206ENST00000423161 CACNA1FO60840 1977 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 RIMBP2O15034 1052 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 FOXN1O15353 648 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 WWC1Q8IX03 1113 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 DBNDD1Q9H9R9 158 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 SEC31BQ9NQW1 1179 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 MAP3K2Q9Y2U5 619 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 SCN9AQ15858 1988 aa23.8■■□□□ 1.4
SREBF1-206ENST00000423161 PDE8AO60658 829 aa23.79■■□□□ 1.4
SREBF1-206ENST00000423161 CCDC152Q4G0S7 254 aa23.79■■□□□ 1.4
SREBF1-206ENST00000423161 JARID2Q92833 1246 aaPredicted RBP23.79■■□□□ 1.4
SREBF1-206ENST00000423161 EYA3Q99504 573 aa23.79■■□□□ 1.4
SREBF1-206ENST00000423161 STK31Q9BXU1 1019 aa23.79■■□□□ 1.4
SREBF1-206ENST00000423161 AIDAQ96BJ3 306 aa23.78■■□□□ 1.4
SREBF1-206ENST00000423161 CNOT7Q9UIV1 285 aaKnown RBP23.78■■□□□ 1.4
SREBF1-206ENST00000423161 WDR33Q9C0J8 1336 aaKnown RBP23.78■■□□□ 1.4
SREBF1-206ENST00000423161 THSD7BQ9C0I4 1608 aa23.77■■□□□ 1.4
SREBF1-206ENST00000423161 PSMD14O00487 310 aa23.77■■□□□ 1.4
SREBF1-206ENST00000423161 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-206ENST00000423161 KSR2Q6VAB6 950 aa23.77■■□□□ 1.4
SREBF1-206ENST00000423161 TBC1D16Q8TBP0 767 aa23.77■■□□□ 1.4
SREBF1-206ENST00000423161 TRPM4Q8TD43 1214 aa23.77■■□□□ 1.4
SREBF1-206ENST00000423161 GPR101Q96P66 508 aaPredicted RBP23.77■■□□□ 1.4
SREBF1-206ENST00000423161 MRS2Q9HD23 443 aa23.77■■□□□ 1.4
SREBF1-206ENST00000423161 POLR2AP24928 1970 aaKnown RBP23.77■■□□□ 1.4
SREBF1-206ENST00000423161 PSME4Q14997 1843 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 SHTN1A0MZ66 631 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 PI4KAP2A4QPH2 592 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 H7C1D1 291 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 ECE2O60344 883 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 HIRAP54198 1017 aaPredicted RBP23.76■■□□□ 1.39
SREBF1-206ENST00000423161 TWISTNBQ3B726 338 aaPredicted RBP23.76■■□□□ 1.39
SREBF1-206ENST00000423161 CST9Q5W186 159 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 MICALL2Q8IY33 904 aa23.76■■□□□ 1.39
SREBF1-206ENST00000423161 PI4KAP1Q8N8J0 262 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms