RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
COPS3-202ENST00000417352 DDX10Q13206 875 aaKnown RBP9.16□□□□□ -0.94
COPS3-202ENST00000417352 RTKN2Q8IZC4 609 aa9.16□□□□□ -0.94
COPS3-202ENST00000417352 ZNF428Q96B54 188 aa9.16□□□□□ -0.94
COPS3-202ENST00000417352 ZFP91Q96JP5 570 aaPredicted RBP9.16□□□□□ -0.94
COPS3-202ENST00000417352 NYXQ9GZU5 481 aa9.16□□□□□ -0.94
COPS3-202ENST00000417352 FER1L6Q2WGJ9 1857 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 BCORQ6W2J9 1755 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 IQCA1LA6NCM1 817 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 EIF4A1P60842 406 aaKnown RBP9.15□□□□□ -0.94
COPS3-202ENST00000417352 AIMP1Q12904 312 aaKnown RBP9.15□□□□□ -0.94
COPS3-202ENST00000417352 TTLL7Q6ZT98 887 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 MICALL2Q8IY33 904 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 CCDC146Q8IYE0 955 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 SYNE4Q8N205 404 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 JDP2Q8WYK2 163 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 GJA3Q9Y6H8 435 aa9.15□□□□□ -0.94
COPS3-202ENST00000417352 DICER1Q9UPY3 1922 aaKnown RBP9.14□□□□□ -0.95
COPS3-202ENST00000417352 POTECB2RU33 542 aa9.14□□□□□ -0.95
COPS3-202ENST00000417352 FKBP4Q02790 459 aaKnown RBP eCLIP9.14□□□□□ -0.95
COPS3-202ENST00000417352 WDR43Q15061 677 aaKnown RBP eCLIP9.14□□□□□ -0.95
COPS3-202ENST00000417352 RBM17Q96I25 401 aaKnown RBP9.14□□□□□ -0.95
COPS3-202ENST00000417352 PLEKHF1Q96S99 279 aa9.14□□□□□ -0.95
COPS3-202ENST00000417352 MKRN1Q9UHC7 482 aaKnown RBP9.14□□□□□ -0.95
COPS3-202ENST00000417352 MAP3K15Q6ZN16 1313 aa9.13□□□□□ -0.95
COPS3-202ENST00000417352 NUP98P52948 1817 aa9.13□□□□□ -0.95
COPS3-202ENST00000417352 ERVV-1B6SEH8 477 aa9.13□□□□□ -0.95
COPS3-202ENST00000417352 ANXA1P04083 346 aa9.13□□□□□ -0.95
COPS3-202ENST00000417352 SUSD4Q5VX71 490 aa9.13□□□□□ -0.95
COPS3-202ENST00000417352 PPP1R42Q7Z4L9 355 aa9.13□□□□□ -0.95
COPS3-202ENST00000417352 LTBP3Q9NS15 1303 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 IARSP41252 1262 aaKnown RBP9.12□□□□□ -0.95
COPS3-202ENST00000417352 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
COPS3-202ENST00000417352 LMOD3Q0VAK6 560 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 RALBP1Q15311 655 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
COPS3-202ENST00000417352 TMEM92Q6UXU6 159 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 LARGE2Q8N3Y3 721 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 MS4A4AQ96JQ5 239 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 NLRP3Q96P20 1036 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 HACL1Q9UJ83 578 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
COPS3-202ENST00000417352 RNF123Q5XPI4 1314 aa9.11□□□□□ -0.95
COPS3-202ENST00000417352 ZNF541Q9H0D2 1346 aa9.11□□□□□ -0.95
COPS3-202ENST00000417352 PPEF1O14829 653 aaPredicted RBP9.11□□□□□ -0.95
COPS3-202ENST00000417352 RIMBP2O15034 1052 aa9.11□□□□□ -0.95
COPS3-202ENST00000417352 LMOD1P29536 600 aaPredicted RBP9.11□□□□□ -0.95
COPS3-202ENST00000417352 PAXIP1Q6ZW49 1069 aaPredicted RBP9.11□□□□□ -0.95
COPS3-202ENST00000417352 TNS4Q8IZW8 715 aa9.11□□□□□ -0.95
COPS3-202ENST00000417352 C7orf43Q8WVR3 580 aa9.11□□□□□ -0.95
COPS3-202ENST00000417352 UTP14AQ9BVJ6 771 aaKnown RBP9.11□□□□□ -0.95
COPS3-202ENST00000417352 TAF1DQ9H5J8 278 aaPredicted RBP9.11□□□□□ -0.95
COPS3-202ENST00000417352 KDM3BQ7LBC6 1761 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 ARFGEF2Q9Y6D5 1785 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 KLRG2A4D1S0 409 aaPredicted RBP9.1□□□□□ -0.95
COPS3-202ENST00000417352 HSPA1AP0DMV8 641 aaKnown RBP9.1□□□□□ -0.95
COPS3-202ENST00000417352 HSPA1BP0DMV9 641 aaKnown RBP9.1□□□□□ -0.95
COPS3-202ENST00000417352 EPHX2P34913 555 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 TMPOP42166 694 aaKnown RBP9.1□□□□□ -0.95
COPS3-202ENST00000417352 GRM1Q13255 1194 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
COPS3-202ENST00000417352 COPS6Q7L5N1 327 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 LDHDQ86WU2 507 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 JMYQ8N9B5 988 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 TRMT112Q9UI30 125 aaKnown RBP9.1□□□□□ -0.95
COPS3-202ENST00000417352 ABCC12Q96J65 1359 aa9.1□□□□□ -0.95
COPS3-202ENST00000417352 UBN2Q6ZU65 1347 aa9.09□□□□□ -0.95
COPS3-202ENST00000417352 RGL2O15211 777 aa9.09□□□□□ -0.95
COPS3-202ENST00000417352 PPIP5K2O43314 1243 aa9.09□□□□□ -0.95
COPS3-202ENST00000417352 HCLS1P14317 486 aaPredicted RBP9.09□□□□□ -0.95
COPS3-202ENST00000417352 GIGYF2Q6Y7W6 1299 aaKnown RBP9.09□□□□□ -0.95
COPS3-202ENST00000417352 PNMA8AQ86V59 439 aaPredicted RBP9.09□□□□□ -0.95
COPS3-202ENST00000417352 NIM1KQ8IY84 436 aa9.09□□□□□ -0.95
COPS3-202ENST00000417352 ZNF34Q8IZ26 560 aa9.09□□□□□ -0.95
COPS3-202ENST00000417352 GPC2Q8N158 579 aa9.09□□□□□ -0.95
COPS3-202ENST00000417352 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
COPS3-202ENST00000417352 ABT1Q9ULW3 272 aaKnown RBP9.09□□□□□ -0.95
COPS3-202ENST00000417352 TMEM88BA6NKF7 163 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 AOC3Q16853 763 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 KRT24Q2M2I5 525 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 PARP10Q53GL7 1025 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
COPS3-202ENST00000417352 CC2D2BQ6DHV5 1058 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 DDX46Q7L014 1031 aaKnown RBP9.08□□□□□ -0.96
COPS3-202ENST00000417352 CNTROBQ8N137 903 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 AIDAQ96BJ3 306 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 RUNDC1Q96C34 613 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 PSMD1Q99460 953 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 SCN4AP35499 1836 aa9.08□□□□□ -0.96
COPS3-202ENST00000417352 MYBBP1AQ9BQG0 1328 aaKnown RBP9.07□□□□□ -0.96
COPS3-202ENST00000417352 FZD9O00144 591 aa9.07□□□□□ -0.96
COPS3-202ENST00000417352 NTSR2O95665 410 aa9.07□□□□□ -0.96
COPS3-202ENST00000417352 CRY2Q49AN0 593 aa9.07□□□□□ -0.96
COPS3-202ENST00000417352 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
COPS3-202ENST00000417352 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
COPS3-202ENST00000417352 DPP8Q6V1X1 898 aaPredicted RBP9.07□□□□□ -0.96
COPS3-202ENST00000417352 SLC51AQ86UW1 340 aa9.07□□□□□ -0.96
COPS3-202ENST00000417352 CRAMP1Q96RY5 1269 aa9.07□□□□□ -0.96
COPS3-202ENST00000417352 CHPF2Q9P2E5 772 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms