RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ERVV-1B6SEH8 477 aa21.2■□□□□ 0.98
CPNE1-208ENST00000414711 EGFRP00533 1210 aa21.2■□□□□ 0.98
CPNE1-208ENST00000414711 DPF2Q92785 391 aa21.2■□□□□ 0.98
CPNE1-208ENST00000414711 ABCC4O15439 1325 aa21.2■□□□□ 0.98
CPNE1-208ENST00000414711 LAMB4A4D0S4 1761 aa21.19■□□□□ 0.98
CPNE1-208ENST00000414711 TBC1D8O95759 1140 aa21.19■□□□□ 0.98
CPNE1-208ENST00000414711 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-208ENST00000414711 SUSD4Q5VX71 490 aa21.19■□□□□ 0.98
CPNE1-208ENST00000414711 MPNDQ8N594 471 aa21.19■□□□□ 0.98
CPNE1-208ENST00000414711 MAP3K15Q6ZN16 1313 aa21.19■□□□□ 0.98
CPNE1-208ENST00000414711 NTSR2O95665 410 aa21.18■□□□□ 0.98
CPNE1-208ENST00000414711 POLR2AP24928 1970 aaKnown RBP21.17■□□□□ 0.98
CPNE1-208ENST00000414711 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-208ENST00000414711 SULF1Q8IWU6 871 aa21.17■□□□□ 0.98
CPNE1-208ENST00000414711 NGEFQ8N5V2 710 aa21.17■□□□□ 0.98
CPNE1-208ENST00000414711 COL3A1P02461 1466 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-208ENST00000414711 DUOX1Q9NRD9 1551 aa21.16■□□□□ 0.98
CPNE1-208ENST00000414711 GPR25O00155 361 aa21.16■□□□□ 0.98
CPNE1-208ENST00000414711 U2SURPO15042 1029 aaKnown RBP21.16■□□□□ 0.98
CPNE1-208ENST00000414711 NOM1Q5C9Z4 860 aaKnown RBP21.16■□□□□ 0.98
CPNE1-208ENST00000414711 RBM26Q5T8P6 1007 aaKnown RBP21.16■□□□□ 0.98
CPNE1-208ENST00000414711 KIF6Q6ZMV9 814 aa21.16■□□□□ 0.98
CPNE1-208ENST00000414711 CDCA5Q96FF9 252 aa21.16■□□□□ 0.98
CPNE1-208ENST00000414711 NLRP3Q96P20 1036 aa21.16■□□□□ 0.98
CPNE1-208ENST00000414711 GGA3Q9NZ52 723 aa21.16■□□□□ 0.98
CPNE1-208ENST00000414711 PAPPA2Q9BXP8 1791 aa21.15■□□□□ 0.98
CPNE1-208ENST00000414711 PSMD14O00487 310 aa21.15■□□□□ 0.98
CPNE1-208ENST00000414711 SP8Q8IXZ3 490 aa21.15■□□□□ 0.98
CPNE1-208ENST00000414711 POTEFA5A3E0 1075 aa21.14■□□□□ 0.97
CPNE1-208ENST00000414711 DLL1O00548 723 aa21.13■□□□□ 0.97
CPNE1-208ENST00000414711 RPS12P25398 132 aaKnown RBP21.13■□□□□ 0.97
CPNE1-208ENST00000414711 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
CPNE1-208ENST00000414711 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
CPNE1-208ENST00000414711 ZBTB3Q9H5J0 574 aa21.13■□□□□ 0.97
CPNE1-208ENST00000414711 HTTP42858 3142 aa21.13■□□□□ 0.97
CPNE1-208ENST00000414711 BBOX1O75936 387 aa21.12■□□□□ 0.97
CPNE1-208ENST00000414711 FKBP1BP68106 108 aa21.12■□□□□ 0.97
CPNE1-208ENST00000414711 ZNF34Q8IZ26 560 aa21.12■□□□□ 0.97
CPNE1-208ENST00000414711 FKTNO75072 461 aa21.11■□□□□ 0.97
CPNE1-208ENST00000414711 PPP1R42Q7Z4L9 355 aa21.11■□□□□ 0.97
CPNE1-208ENST00000414711 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
CPNE1-208ENST00000414711 COLQQ9Y215 455 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-208ENST00000414711 RBBP6Q7Z6E9 1792 aaKnown RBP21.1■□□□□ 0.97
CPNE1-208ENST00000414711 ASTN2O75129 1339 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-208ENST00000414711 INTS3Q68E01 1043 aaKnown RBP21.1■□□□□ 0.97
CPNE1-208ENST00000414711 MCM10Q7L590 875 aa21.1■□□□□ 0.97
CPNE1-208ENST00000414711 DBNDD1Q9H9R9 158 aa21.1■□□□□ 0.97
CPNE1-208ENST00000414711 TRIOBPQ9H2D6 2365 aa21.09■□□□□ 0.97
CPNE1-208ENST00000414711 LRRC37AA6NMS7 1700 aa21.08■□□□□ 0.97
CPNE1-208ENST00000414711 PRKAR2BP31323 418 aa21.08■□□□□ 0.97
CPNE1-208ENST00000414711 PARP10Q53GL7 1025 aa21.08■□□□□ 0.97
CPNE1-208ENST00000414711 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
CPNE1-208ENST00000414711 LAMB2P55268 1798 aa21.08■□□□□ 0.96
CPNE1-208ENST00000414711 TM4SF4P48230 202 aa21.07■□□□□ 0.96
CPNE1-208ENST00000414711 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
CPNE1-208ENST00000414711 RRP7AQ9Y3A4 280 aaKnown RBP21.07■□□□□ 0.96
CPNE1-208ENST00000414711 RTL9Q8NET4 1388 aa21.07■□□□□ 0.96
CPNE1-208ENST00000414711 SZT2Q5T011 3432 aa21.07■□□□□ 0.96
CPNE1-208ENST00000414711 DDX60Q8IY21 1712 aaKnown RBP21.07■□□□□ 0.96
CPNE1-208ENST00000414711 ANKRD36CQ5JPF3 1778 aa21.06■□□□□ 0.96
CPNE1-208ENST00000414711 GRAPQ13588 217 aa21.06■□□□□ 0.96
CPNE1-208ENST00000414711 WASHC4Q2M389 1173 aa21.06■□□□□ 0.96
CPNE1-208ENST00000414711 GIGYF2Q6Y7W6 1299 aaKnown RBP21.06■□□□□ 0.96
CPNE1-208ENST00000414711 GRAPLQ8TC17 118 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-208ENST00000414711 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
CPNE1-208ENST00000414711 KIAA0100Q14667 2235 aaKnown RBP21.06■□□□□ 0.96
CPNE1-208ENST00000414711 MYL6BP14649 208 aa21.05■□□□□ 0.96
CPNE1-208ENST00000414711 ANGEL2Q5VTE6 544 aaKnown RBP21.05■□□□□ 0.96
CPNE1-208ENST00000414711 MOB2Q70IA6 237 aa21.05■□□□□ 0.96
CPNE1-208ENST00000414711 DDX46Q7L014 1031 aaKnown RBP21.05■□□□□ 0.96
CPNE1-208ENST00000414711 CFHR5Q9BXR6 569 aa21.05■□□□□ 0.96
CPNE1-208ENST00000414711 ECE2O60344 883 aa21.04■□□□□ 0.96
CPNE1-208ENST00000414711 HSPA5P11021 654 aaKnown RBP21.04■□□□□ 0.96
CPNE1-208ENST00000414711 SREBF2Q12772 1141 aa21.04■□□□□ 0.96
CPNE1-208ENST00000414711 R3HDMLQ9H3Y0 253 aa21.04■□□□□ 0.96
CPNE1-208ENST00000414711 TRIM17Q9Y577 477 aa21.04■□□□□ 0.96
CPNE1-208ENST00000414711 BRCA2P51587 3418 aa21.03■□□□□ 0.96
CPNE1-208ENST00000414711 EIF4G2P78344 907 aaKnown RBP eCLIP21.03■□□□□ 0.96
CPNE1-208ENST00000414711 MKRN3Q13064 507 aaKnown RBP21.03■□□□□ 0.96
CPNE1-208ENST00000414711 DCTN1Q14203 1278 aa21.03■□□□□ 0.96
CPNE1-208ENST00000414711 TMC4Q7Z404 712 aa21.03■□□□□ 0.96
CPNE1-208ENST00000414711 RSPH6AQ9H0K4 717 aa21.03■□□□□ 0.96
CPNE1-208ENST00000414711 KCNQ5Q9NR82 932 aa21.03■□□□□ 0.96
CPNE1-208ENST00000414711 UBE2Q2LH0YL09 131 aa21.02■□□□□ 0.96
CPNE1-208ENST00000414711 RIMBP2O15034 1052 aa21.02■□□□□ 0.96
CPNE1-208ENST00000414711 EN2P19622 333 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-208ENST00000414711 SLC17A8Q8NDX2 589 aa21.02■□□□□ 0.96
CPNE1-208ENST00000414711 CEP290O15078 2479 aa21.02■□□□□ 0.96
CPNE1-208ENST00000414711 CENPFP49454 3210 aa21.02■□□□□ 0.95
CPNE1-208ENST00000414711 CUL9Q8IWT3 2517 aa21.02■□□□□ 0.95
CPNE1-208ENST00000414711 HCLS1P14317 486 aaPredicted RBP21.01■□□□□ 0.95
CPNE1-208ENST00000414711 SCARF1Q14162 830 aa21.01■□□□□ 0.95
CPNE1-208ENST00000414711 CC2D1BQ5T0F9 858 aaKnown RBP21.01■□□□□ 0.95
CPNE1-208ENST00000414711 OTOP1Q7RTM1 612 aa21.01■□□□□ 0.95
CPNE1-208ENST00000414711 DOK7Q18PE1 504 aa21■□□□□ 0.95
CPNE1-208ENST00000414711 MIS18AQ9NYP9 233 aa21■□□□□ 0.95
CPNE1-208ENST00000414711 TAF1P21675 1872 aa20.99■□□□□ 0.95
CPNE1-208ENST00000414711 C6orf229H3BNL8 230 aa20.99■□□□□ 0.95
CPNE1-208ENST00000414711 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-208ENST00000414711 NSFL1CQ9UNZ2 370 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms