RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 BLOC1S2Q6QNY1 142 aa18.96■□□□□ 0.63
HOXD3-202ENST00000410016 LETM1O95202 739 aaPredicted RBP18.96■□□□□ 0.63
HOXD3-202ENST00000410016 MCM5P33992 734 aa18.96■□□□□ 0.63
HOXD3-202ENST00000410016 HMG20BQ9P0W2 317 aa18.96■□□□□ 0.63
HOXD3-202ENST00000410016 A0A087WZG4 1122 aa18.95■□□□□ 0.62
HOXD3-202ENST00000410016 UVSSAQ2YD98 709 aa18.95■□□□□ 0.62
HOXD3-202ENST00000410016 TCEANC2Q96MN5 208 aa18.95■□□□□ 0.62
HOXD3-202ENST00000410016 CCDC39Q9UFE4 941 aa18.95■□□□□ 0.62
HOXD3-202ENST00000410016 ANKRD1Q15327 319 aa18.95■□□□□ 0.62
HOXD3-202ENST00000410016 PLBD2Q8NHP8 589 aa18.95■□□□□ 0.62
HOXD3-202ENST00000410016 PDIA4P13667 645 aaKnown RBP18.94■□□□□ 0.62
HOXD3-202ENST00000410016 CABP4P57796 275 aa18.94■□□□□ 0.62
HOXD3-202ENST00000410016 LARP1BQ659C4 914 aaKnown RBP18.94■□□□□ 0.62
HOXD3-202ENST00000410016 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
HOXD3-202ENST00000410016 VPS37CA5D8V6 355 aaPredicted RBP18.93■□□□□ 0.62
HOXD3-202ENST00000410016 CSPP1Q1MSJ5 1256 aa18.93■□□□□ 0.62
HOXD3-202ENST00000410016 FUCA2Q9BTY2 467 aa18.93■□□□□ 0.62
HOXD3-202ENST00000410016 NDUFB9Q9Y6M9 179 aa18.93■□□□□ 0.62
HOXD3-202ENST00000410016 DCCP43146 1447 aa18.93■□□□□ 0.62
HOXD3-202ENST00000410016 CHGBP05060 677 aa18.93■□□□□ 0.62
HOXD3-202ENST00000410016 DBNDD2Q9BQY9 259 aa18.93■□□□□ 0.62
HOXD3-202ENST00000410016 NBPF26B4DH59 902 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 NBPF14Q5TI25 921 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 NBPF10Q6P3W6 841 aaKnown RBP18.92■□□□□ 0.62
HOXD3-202ENST00000410016 NBPF15Q8N660 670 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 HAUS7Q99871 368 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 TPRNQ4KMQ1 711 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 CDC37L1Q7L3B6 337 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 GLI3P10071 1580 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
HOXD3-202ENST00000410016 H7C1W4 665 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 FOXO4P98177 505 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.91■□□□□ 0.62
HOXD3-202ENST00000410016 SPATA31A3Q5VYP0 1347 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 CPDO75976 1380 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 RFX7Q2KHR2 1363 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 HCLS1P14317 486 aaPredicted RBP18.91■□□□□ 0.62
HOXD3-202ENST00000410016 LMBR1LQ6UX01 489 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 PKD1L3Q7Z443 1732 aa18.91■□□□□ 0.62
HOXD3-202ENST00000410016 PDCP20941 246 aa18.9■□□□□ 0.62
HOXD3-202ENST00000410016 SEC62Q99442 399 aaKnown RBP18.9■□□□□ 0.62
HOXD3-202ENST00000410016 ZNF609O15014 1411 aa18.9■□□□□ 0.62
HOXD3-202ENST00000410016 GIMAP6Q6P9H5 292 aa18.9■□□□□ 0.62
HOXD3-202ENST00000410016 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
HOXD3-202ENST00000410016 TPM2P07951 284 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 KRT32Q14532 448 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 ARFGEF2Q9Y6D5 1785 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 TERF1P54274 439 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 FAM173BQ6P4H8 233 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 CCDC129Q6ZRS4 1044 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 ATG9AQ7Z3C6 839 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 FERMT3Q86UX7 667 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 DNAJC2Q99543 621 aaKnown RBP18.89■□□□□ 0.61
HOXD3-202ENST00000410016 USP25Q9UHP3 1055 aa18.89■□□□□ 0.61
HOXD3-202ENST00000410016 ELP1O95163 1332 aa18.88■□□□□ 0.61
HOXD3-202ENST00000410016 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
HOXD3-202ENST00000410016 NEK1Q96PY6 1258 aa18.88■□□□□ 0.61
HOXD3-202ENST00000410016 CYP21A2P08686 494 aa18.88■□□□□ 0.61
HOXD3-202ENST00000410016 KRT85P78386 507 aa18.88■□□□□ 0.61
HOXD3-202ENST00000410016 TTLL7Q6ZT98 887 aa18.87■□□□□ 0.61
HOXD3-202ENST00000410016 DDX46Q7L014 1031 aaKnown RBP18.87■□□□□ 0.61
HOXD3-202ENST00000410016 KBTBD3Q8NAB2 608 aa18.87■□□□□ 0.61
HOXD3-202ENST00000410016 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
HOXD3-202ENST00000410016 AFDNP55196 1824 aaKnown RBP18.87■□□□□ 0.61
HOXD3-202ENST00000410016 STK3Q13188 491 aa18.86■□□□□ 0.61
HOXD3-202ENST00000410016 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
HOXD3-202ENST00000410016 GTF3C6Q969F1 213 aa18.86■□□□□ 0.61
HOXD3-202ENST00000410016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
HOXD3-202ENST00000410016 KDM4AO75164 1064 aa18.85■□□□□ 0.61
HOXD3-202ENST00000410016 ADCY5O95622 1261 aa18.85■□□□□ 0.61
HOXD3-202ENST00000410016 GPR108Q9NPR9 543 aa18.85■□□□□ 0.61
HOXD3-202ENST00000410016 SH3TC1Q8TE82 1336 aa18.85■□□□□ 0.61
HOXD3-202ENST00000410016 PTMAP06454 111 aaKnown RBP18.84■□□□□ 0.61
HOXD3-202ENST00000410016 CWC25Q9NXE8 425 aaPredicted RBP18.84■□□□□ 0.61
HOXD3-202ENST00000410016 JAK2O60674 1132 aa18.84■□□□□ 0.61
HOXD3-202ENST00000410016 A1BGP04217 495 aa18.84■□□□□ 0.61
HOXD3-202ENST00000410016 TIMM10P62072 90 aa18.84■□□□□ 0.61
HOXD3-202ENST00000410016 Q6ZUG5 572 aa18.84■□□□□ 0.61
HOXD3-202ENST00000410016 ZCRB1Q8TBF4 217 aaKnown RBP18.84■□□□□ 0.61
HOXD3-202ENST00000410016 ERVV-2B6SEH9 535 aa18.83■□□□□ 0.61
HOXD3-202ENST00000410016 LIG1P18858 919 aa18.83■□□□□ 0.61
HOXD3-202ENST00000410016 STOX1Q6ZVD7 989 aa18.83■□□□□ 0.61
HOXD3-202ENST00000410016 SCAND2PQ9GZW5 306 aaPredicted RBP18.83■□□□□ 0.61
HOXD3-202ENST00000410016 LAMB4A4D0S4 1761 aa18.83■□□□□ 0.6
HOXD3-202ENST00000410016 PARP4Q9UKK3 1724 aaKnown RBP18.83■□□□□ 0.6
HOXD3-202ENST00000410016 SLFNL1Q499Z3 407 aa18.83■□□□□ 0.6
HOXD3-202ENST00000410016 CHMP3Q9Y3E7 222 aa18.83■□□□□ 0.6
HOXD3-202ENST00000410016 R3HCC1Q9Y3T6 440 aaKnown RBP18.83■□□□□ 0.6
HOXD3-202ENST00000410016 PALLDQ8WX93 1383 aa18.83■□□□□ 0.6
HOXD3-202ENST00000410016 WDR17Q8IZU2 1322 aa18.82■□□□□ 0.6
HOXD3-202ENST00000410016 PCDH11XQ9BZA7 1347 aa18.82■□□□□ 0.6
HOXD3-202ENST00000410016 PCDH11YQ9BZA8 1340 aa18.82■□□□□ 0.6
HOXD3-202ENST00000410016 IL15P40933 162 aaPredicted RBP18.82■□□□□ 0.6
HOXD3-202ENST00000410016 NKX1-1Q15270 411 aaPredicted RBP18.82■□□□□ 0.6
HOXD3-202ENST00000410016 NEUROD6Q96NK8 337 aa18.82■□□□□ 0.6
HOXD3-202ENST00000410016 TFIP11Q9UBB9 837 aaKnown RBP18.82■□□□□ 0.6
HOXD3-202ENST00000410016 AP5Z1O43299 807 aa18.82■□□□□ 0.6
HOXD3-202ENST00000410016 TICAM2Q86XR7 235 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms