RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CFAP44Q96MT7 982 aa15.85■□□□□ 0.13
SPTLC1P3-201ENST00000403408 COL4A1P02462 1669 aa15.85■□□□□ 0.13
SPTLC1P3-201ENST00000403408 EGFRP00533 1210 aa15.84■□□□□ 0.13
SPTLC1P3-201ENST00000403408 ANXA1P04083 346 aa15.84■□□□□ 0.13
SPTLC1P3-201ENST00000403408 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
SPTLC1P3-201ENST00000403408 KIF6Q6ZMV9 814 aa15.84■□□□□ 0.13
SPTLC1P3-201ENST00000403408 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
SPTLC1P3-201ENST00000403408 FAM155AB1AL88 458 aaPredicted RBP15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 CA12O43570 354 aa15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 KIAA2012Q0VF49 1180 aa15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 USP48Q86UV5 1035 aa15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 VPS33BQ9H267 617 aa15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 NUDCQ9Y266 331 aa15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 MKI67P46013 3256 aaKnown RBP15.83■□□□□ 0.12
SPTLC1P3-201ENST00000403408 HCLS1P14317 486 aaPredicted RBP15.82■□□□□ 0.12
SPTLC1P3-201ENST00000403408 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
SPTLC1P3-201ENST00000403408 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
SPTLC1P3-201ENST00000403408 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
SPTLC1P3-201ENST00000403408 PCDH10Q9P2E7 1040 aa15.82■□□□□ 0.12
SPTLC1P3-201ENST00000403408 CNOT7Q9UIV1 285 aaKnown RBP15.82■□□□□ 0.12
SPTLC1P3-201ENST00000403408 ANKRD36CQ5JPF3 1778 aa15.82■□□□□ 0.12
SPTLC1P3-201ENST00000403408 DPP8Q6V1X1 898 aaPredicted RBP15.81■□□□□ 0.12
SPTLC1P3-201ENST00000403408 SAMD7Q7Z3H4 446 aa15.81■□□□□ 0.12
SPTLC1P3-201ENST00000403408 SP8Q8IXZ3 490 aa15.81■□□□□ 0.12
SPTLC1P3-201ENST00000403408 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
SPTLC1P3-201ENST00000403408 ZNF428Q96B54 188 aa15.81■□□□□ 0.12
SPTLC1P3-201ENST00000403408 HUNKP57058 714 aa15.8■□□□□ 0.12
SPTLC1P3-201ENST00000403408 CDC37L1Q7L3B6 337 aa15.8■□□□□ 0.12
SPTLC1P3-201ENST00000403408 PPP1R42Q7Z4L9 355 aa15.8■□□□□ 0.12
SPTLC1P3-201ENST00000403408 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
SPTLC1P3-201ENST00000403408 MPNDQ8N594 471 aa15.8■□□□□ 0.12
SPTLC1P3-201ENST00000403408 UTP14AQ9BVJ6 771 aaKnown RBP15.8■□□□□ 0.12
SPTLC1P3-201ENST00000403408 KCNQ5Q9NR82 932 aa15.8■□□□□ 0.12
SPTLC1P3-201ENST00000403408 HTTP42858 3142 aa15.79■□□□□ 0.12
SPTLC1P3-201ENST00000403408 CDHR2Q9BYE9 1310 aa15.79■□□□□ 0.12
SPTLC1P3-201ENST00000403408 SOX10P56693 466 aa15.79■□□□□ 0.12
SPTLC1P3-201ENST00000403408 NOGQ13253 232 aa15.79■□□□□ 0.12
SPTLC1P3-201ENST00000403408 PARP10Q53GL7 1025 aa15.79■□□□□ 0.12
SPTLC1P3-201ENST00000403408 PNISRQ8TF01 805 aaKnown RBP15.79■□□□□ 0.12
SPTLC1P3-201ENST00000403408 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
SPTLC1P3-201ENST00000403408 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
SPTLC1P3-201ENST00000403408 LRRC37AA6NMS7 1700 aa15.78■□□□□ 0.12
SPTLC1P3-201ENST00000403408 ADM5C9JUS6 153 aa15.78■□□□□ 0.12
SPTLC1P3-201ENST00000403408 PSMD14O00487 310 aa15.78■□□□□ 0.12
SPTLC1P3-201ENST00000403408 BBOX1O75936 387 aa15.78■□□□□ 0.12
SPTLC1P3-201ENST00000403408 NLRP10Q86W26 655 aa15.78■□□□□ 0.12
SPTLC1P3-201ENST00000403408 SUPT20HQ8NEM7 779 aa15.78■□□□□ 0.12
SPTLC1P3-201ENST00000403408 RTL9Q8NET4 1388 aa15.77■□□□□ 0.12
SPTLC1P3-201ENST00000403408 ASTN2O75129 1339 aaPredicted RBP15.77■□□□□ 0.12
SPTLC1P3-201ENST00000403408 ERBB4Q15303 1308 aa15.77■□□□□ 0.12
SPTLC1P3-201ENST00000403408 KIF23Q02241 960 aaPredicted RBP15.77■□□□□ 0.12
SPTLC1P3-201ENST00000403408 TNIP1Q15025 636 aa15.77■□□□□ 0.12
SPTLC1P3-201ENST00000403408 TBC1D10BQ4KMP7 808 aaPredicted RBP15.77■□□□□ 0.12
SPTLC1P3-201ENST00000403408 CENPFP49454 3210 aa15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 EIF2S2P20042 333 aaKnown RBP15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 GRAPQ13588 217 aa15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 RGMBQ6NW40 437 aa15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 GRAPLQ8TC17 118 aaPredicted RBP15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 RNF186Q9NXI6 227 aa15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 DDX60Q8IY21 1712 aaKnown RBP15.76■□□□□ 0.11
SPTLC1P3-201ENST00000403408 DBNDD1Q9H9R9 158 aa15.75■□□□□ 0.11
SPTLC1P3-201ENST00000403408 GBA2Q9HCG7 927 aaPredicted RBP15.75■□□□□ 0.11
SPTLC1P3-201ENST00000403408 POLLQ9UGP5 575 aa15.75■□□□□ 0.11
SPTLC1P3-201ENST00000403408 AKAP11Q9UKA4 1901 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 H7C1D1 291 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 TRPA1O75762 1119 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 XAGE3Q8WTP9 111 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 DPF2Q92785 391 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 CELF1Q92879 486 aaKnown RBP15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 CSRNP1Q96S65 589 aa15.74■□□□□ 0.11
SPTLC1P3-201ENST00000403408 BRCA2P51587 3418 aa15.73■□□□□ 0.11
SPTLC1P3-201ENST00000403408 RBM26Q5T8P6 1007 aaKnown RBP15.73■□□□□ 0.11
SPTLC1P3-201ENST00000403408 DDX46Q7L014 1031 aaKnown RBP15.73■□□□□ 0.11
SPTLC1P3-201ENST00000403408 SAGE1Q9NXZ1 904 aa15.73■□□□□ 0.11
SPTLC1P3-201ENST00000403408 RIMBP2O15034 1052 aa15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 SLC10A3P09131 477 aa15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 GPSM2P81274 684 aa15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 AIMP1Q12904 312 aaKnown RBP15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 TCIRG1Q13488 830 aa15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 KRT24Q2M2I5 525 aa15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 TRMT112Q9UI30 125 aaKnown RBP15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
SPTLC1P3-201ENST00000403408 ZNF157P51786 506 aaPredicted RBP15.71■□□□□ 0.11
SPTLC1P3-201ENST00000403408 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
SPTLC1P3-201ENST00000403408 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
SPTLC1P3-201ENST00000403408 WASHC4Q2M389 1173 aa15.7■□□□□ 0.1
SPTLC1P3-201ENST00000403408 ECE2O60344 883 aa15.69■□□□□ 0.1
SPTLC1P3-201ENST00000403408 MOB2Q70IA6 237 aa15.69■□□□□ 0.1
SPTLC1P3-201ENST00000403408 RASAL3Q86YV0 1011 aa15.69■□□□□ 0.1
SPTLC1P3-201ENST00000403408 C2orf69Q8N8R5 385 aa15.69■□□□□ 0.1
SPTLC1P3-201ENST00000403408 CCDC102AQ96A19 550 aa15.69■□□□□ 0.1
SPTLC1P3-201ENST00000403408 CDCA5Q96FF9 252 aa15.69■□□□□ 0.1
SPTLC1P3-201ENST00000403408 GGA3Q9NZ52 723 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms