RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 PLSCR1O15162 318 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 HMGB2P26583 209 aaKnown RBP6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 NEXNQ0ZGT2 675 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 ZNF710Q8N1W2 664 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 MEIS3Q99687 375 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 USP44Q9H0E7 712 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 GPHNQ9NQX3 736 aaPredicted RBP6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 PCDHB15Q9Y5E8 787 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 BCORQ6W2J9 1755 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 UBR3Q6ZT12 1888 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 MAP3K15Q6ZN16 1313 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 C2orf72A6NCS6 295 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 IGKV5-2P06315 115 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 GNAI3P08754 354 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 KIF6Q6ZMV9 814 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 LRRC4BQ9NT99 713 aa6.92□□□□□ -1.3
SAMSN1-203ENST00000400566 COL15A1P39059 1388 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 UTYO14607 1347 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 NEURL1BA8MQ27 555 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 ERVV-1B6SEH8 477 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 RPS6KA4O75676 772 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 KCNQ4P56696 695 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 TRIM28Q13263 835 aaKnown RBP6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 HDAC1Q13547 482 aaPredicted RBP6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 MFSD10Q14728 455 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 CWF19L2Q2TBE0 894 aaKnown RBP6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 GIGYF2Q6Y7W6 1299 aaKnown RBP6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 DZIP3Q86Y13 1208 aaKnown RBP6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 MYD88Q99836 296 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 ZBTB3Q9H5J0 574 aa6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 ZNF330Q9Y3S2 320 aaPredicted RBP6.91□□□□□ -1.3
SAMSN1-203ENST00000400566 SCN7AQ01118 1682 aa6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 UBTFL1P0CB47 393 aaPredicted RBP6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 PDE4AP27815 886 aa6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 TCIRG1Q13488 830 aa6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 GCKRQ14397 625 aa6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 TXNRD1Q16881 649 aa6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 CENPQQ7L2Z9 268 aaPredicted RBP6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 LARP6Q9BRS8 491 aaKnown RBP6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 C4AP0C0L4 1744 aa6.9□□□□□ -1.3
SAMSN1-203ENST00000400566 A0A087WZG4 1122 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 GRM8O00222 908 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 CAMTA2O94983 1202 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 APBA3O96018 575 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 GNAI2P04899 355 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 NBPF7P0C2Y1 421 aaPredicted RBP6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 HSP90AB3PQ58FF7 597 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 RPAP2Q8IXW5 612 aaPredicted RBP6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 CCDC191Q8NCU4 936 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 ZNF775Q96BV0 537 aaPredicted RBP6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 RWDD1Q9H446 243 aaPredicted RBP6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 C1orf115Q9H7X2 142 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 TBC1D2BQ9UPU7 963 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 HDAC5Q9UQL6 1122 aa6.9□□□□□ -1.31
SAMSN1-203ENST00000400566 ATP5J2-PTCD1G3V325 749 aa6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 GNPATO15228 680 aa6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 IGHDP01880 384 aa6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 DSG2Q14126 1118 aa6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 CEP85Q6P2H3 762 aa6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 SIRT2Q8IXJ6 389 aa6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 ANKRD44Q8N8A2 993 aa6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 C9orf78Q9NZ63 289 aaPredicted RBP6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 RTCBQ9Y3I0 505 aaKnown RBP6.89□□□□□ -1.31
SAMSN1-203ENST00000400566 CASP7P55210 303 aa6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 HLFQ16534 295 aa6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 CLEC4GQ6UXB4 293 aa6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 TMC2Q8TDI7 906 aa6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 AK7Q96M32 723 aa6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 CWC25Q9NXE8 425 aaPredicted RBP6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 LRRFIP2Q9Y608 721 aaKnown RBP6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 TUBGCP6Q96RT7 1819 aa6.88□□□□□ -1.31
SAMSN1-203ENST00000400566 H7C1W4 665 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 SSFA2P28290 1259 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 FOXK1P85037 733 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 MTX1Q13505 466 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 AMIGO3Q86WK7 504 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 SMC5Q8IY18 1101 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 ZNF34Q8IZ26 560 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 DDX27Q96GQ7 796 aaKnown RBP6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 ARXQ96QS3 562 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 NARFQ9UHQ1 456 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 ZNF652Q9Y2D9 606 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 MYH3P11055 1940 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 COL24A1Q17RW2 1714 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 HMMRO75330 724 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 PCCAP05165 728 aaPredicted RBP6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 ATP8B2P98198 1209 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 ZNF787Q6DD87 383 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 UBE3BQ7Z3V4 1068 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 NLRP10Q86W26 655 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 KAZALD1Q96I82 304 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 CAMKK2Q96RR4 588 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 QSER1Q2KHR3 1735 aa6.87□□□□□ -1.31
SAMSN1-203ENST00000400566 UBN2Q6ZU65 1347 aa6.86□□□□□ -1.31
SAMSN1-203ENST00000400566 USP42Q9H9J4 1324 aaKnown RBP6.86□□□□□ -1.31
SAMSN1-203ENST00000400566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms