RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 FAM173BQ6P4H8 233 aa17.23■□□□□ 0.35
SFMBT1-201ENST00000394752 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
SFMBT1-201ENST00000394752 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
SFMBT1-201ENST00000394752 FAM177A1Q8N128 213 aaPredicted RBP17.23■□□□□ 0.35
SFMBT1-201ENST00000394752 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
SFMBT1-201ENST00000394752 ANTXR1Q9H6X2 564 aa17.23■□□□□ 0.35
SFMBT1-201ENST00000394752 IMMTQ16891 758 aaKnown RBP17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 TTLL5Q6EMB2 1281 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 RBSNQ9H1K0 784 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 TTC12Q9H892 705 aaPredicted RBP17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 NRKQ7Z2Y5 1582 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 ZNF771Q7L3S4 317 aaPredicted RBP17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 PALD1Q9ULE6 856 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 VPS53Q5VIR6 699 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 NDUFB9Q9Y6M9 179 aa17.22■□□□□ 0.35
SFMBT1-201ENST00000394752 TPM1P09493 284 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 SYT1P21579 422 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 OSBPL3Q9H4L5 887 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 CLSTN1O94985 981 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 SERPINC1P01008 464 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 GAS2L3Q86XJ1 694 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
SFMBT1-201ENST00000394752 RIMS1Q86UR5 1692 aaKnown RBP17.21■□□□□ 0.34
SFMBT1-201ENST00000394752 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 TSR1Q2NL82 804 aaKnown RBP17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 CHST3Q7LGC8 479 aa17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 PCMTD1Q96MG8 357 aaPredicted RBP17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 F13A1P00488 732 aa17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 TDO2P48775 406 aa17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 BIN1O00499 593 aa17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 TEX13AQ9BXU3 409 aaPredicted RBP17.2■□□□□ 0.34
SFMBT1-201ENST00000394752 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 GCKRQ14397 625 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 EXOC5O00471 708 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 ZNF165P49910 485 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 AIDAQ96BJ3 306 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 C8orf76Q96K31 380 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 MAP7D2Q96T17 732 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 USP16Q9Y5T5 823 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 CCDC112Q8NEF3 446 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 DACT1Q9NYF0 836 aa17.19■□□□□ 0.34
SFMBT1-201ENST00000394752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 RRP9O43818 475 aaKnown RBP17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 ISM2Q6H9L7 571 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 JMYQ8N9B5 988 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 AKAP2Q9Y2D5 859 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 CREB3L3Q68CJ9 461 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 PLBD2Q8NHP8 589 aa17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 C16orf45Q96MC5 204 aaPredicted RBP17.18■□□□□ 0.34
SFMBT1-201ENST00000394752 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 TRIM22Q8IYM9 498 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 LMBRD1Q9NUN5 540 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 TFCP2Q12800 502 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 FSIP1Q8NA03 581 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 SGSM2O43147 1006 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
SFMBT1-201ENST00000394752 XBP1P17861 261 aa17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 INTS4Q96HW7 963 aaKnown RBP17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 TMX4Q9H1E5 349 aaPredicted RBP17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 TRMT1Q9NXH9 659 aaKnown RBP17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 SNX14Q9Y5W7 946 aa17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
SFMBT1-201ENST00000394752 MINDY4BA8MYZ0 360 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 ZNF213O14771 459 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 GADD45BO75293 160 aaPredicted RBP17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 AMOTL1Q8IY63 956 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 ANKRD20A12PQ8NF67 263 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 C1orf167Q5SNV9 1468 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 Q6ZUG5 572 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 RAI14Q9P0K7 980 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 TIMM10P62072 90 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
SFMBT1-201ENST00000394752 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms