RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ATP6V1DQ9Y5K8 247 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 MYH3P11055 1940 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 TCHHQ07283 1943 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 CASP7P55210 303 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 KRT32Q14532 448 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 ANKRD1Q15327 319 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 EPHA10Q5JZY3 1008 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 PRPF40BQ6NWY9 871 aaKnown RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 MAP4K1Q92918 833 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 JAKMIP1Q96N16 626 aaKnown RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 BOLA2Q9H3K6 86 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 ZSWIM6Q9HCJ5 1215 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 GPR108Q9NPR9 543 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 ZDHHC9Q9Y397 364 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 RBM8AQ9Y5S9 174 aaKnown RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 ZNF335Q9H4Z2 1342 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 COL22A1Q8NFW1 1626 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 RPAP1Q9BWH6 1393 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 H7C1W4 665 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 PRPF40AO75400 957 aaKnown RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 NECTIN1Q15223 517 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 CREB3L3Q68CJ9 461 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 CAVIN1Q6NZI2 390 aaKnown RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 RUFY3Q7L099 469 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 RASEFQ8IZ41 740 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 OTUD5Q96G74 571 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 PDRG1Q9NUG6 133 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
SMAD1-202ENST00000394092 TMOD3Q9NYL9 352 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 SMC3Q9UQE7 1217 aa8.62□□□□□ -1.03
SMAD1-202ENST00000394092 PALLDQ8WX93 1383 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 NBPF26B4DH59 902 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
SMAD1-202ENST00000394092 PIP4K2AP48426 406 aaPredicted RBP8.61□□□□□ -1.03
SMAD1-202ENST00000394092 PTH1RQ03431 593 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 TFCP2Q12800 502 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 NBPF10Q6P3W6 841 aaKnown RBP8.61□□□□□ -1.03
SMAD1-202ENST00000394092 POTEGQ6S5H5 508 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 LMBR1LQ6UX01 489 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 NBPF15Q8N660 670 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 KLHDC4Q8TBB5 520 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 DBNLQ9UJU6 430 aaKnown RBP8.61□□□□□ -1.03
SMAD1-202ENST00000394092 FBXO3Q9UK99 471 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 ZNF609O15014 1411 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 MYH7P12883 1935 aa8.61□□□□□ -1.03
SMAD1-202ENST00000394092 A0A0D9SFI3 127 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 CIAO1O76071 339 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 PHF14O94880 888 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 NASPP49321 788 aaPredicted RBP8.6□□□□□ -1.03
SMAD1-202ENST00000394092 CCDC173Q0VFZ6 552 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 LRRFIP1Q32MZ4 808 aaKnown RBP8.6□□□□□ -1.03
SMAD1-202ENST00000394092 ZSCAN23Q3MJ62 389 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 BLOC1S2Q6QNY1 142 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 KIF6Q6ZMV9 814 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 DDX54Q8TDD1 881 aaKnown RBP8.6□□□□□ -1.03
SMAD1-202ENST00000394092 TRIM44Q96DX7 344 aaPredicted RBP8.6□□□□□ -1.03
SMAD1-202ENST00000394092 FAM227BQ96M60 508 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 HAUS7Q99871 368 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 PANK2Q9BZ23 570 aa8.6□□□□□ -1.03
SMAD1-202ENST00000394092 ALDH8A1Q9H2A2 487 aaPredicted RBP8.6□□□□□ -1.03
SMAD1-202ENST00000394092 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
SMAD1-202ENST00000394092 SLC27A2O14975 620 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 STX6O43752 255 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 FOXO4P98177 505 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 TSGA10IPQ3SY00 556 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 TTLL7Q6ZT98 887 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 TMEM87AQ8NBN3 555 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 RTN4Q9NQC3 1192 aaKnown RBP8.59□□□□□ -1.03
SMAD1-202ENST00000394092 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.59□□□□□ -1.03
SMAD1-202ENST00000394092 LAMA4Q16363 1823 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 DISP2A7MBM2 1401 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 STARD3NLO95772 234 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 A1BGP04217 495 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 ZSCAN22P10073 491 aaPredicted RBP8.59□□□□□ -1.03
SMAD1-202ENST00000394092 PDCP20941 246 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 TRIM28Q13263 835 aaKnown RBP8.59□□□□□ -1.03
SMAD1-202ENST00000394092 HSP90AB3PQ58FF7 597 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 GAS2L3Q86XJ1 694 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 GPT2Q8TD30 523 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMAD1-202ENST00000394092 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
SMAD1-202ENST00000394092 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
SMAD1-202ENST00000394092 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.59□□□□□ -1.03
SMAD1-202ENST00000394092 ROBO1Q9Y6N7 1651 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 EYA2O00167 538 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 F13A1P00488 732 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 TCIRG1Q13488 830 aa8.58□□□□□ -1.04
SMAD1-202ENST00000394092 ADCK5Q3MIX3 580 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1415.6 ms