RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 ALDH8A1Q9H2A2 487 aaPredicted RBP13.04□□□□□ -0.32
BEST1-201ENST00000378043 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 PKD1L3Q7Z443 1732 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 ATP5J2-PTCD1G3V325 749 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
BEST1-201ENST00000378043 LETM1O95202 739 aaPredicted RBP13.04□□□□□ -0.32
BEST1-201ENST00000378043 CASP7P55210 303 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
BEST1-201ENST00000378043 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 DCAF5Q96JK2 942 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 CHRNA2Q15822 529 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 RNF20Q5VTR2 975 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
BEST1-201ENST00000378043 ABCC6O95255 1503 aa13.03□□□□□ -0.32
BEST1-201ENST00000378043 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
BEST1-201ENST00000378043 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
BEST1-201ENST00000378043 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
BEST1-201ENST00000378043 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
BEST1-201ENST00000378043 ZNF609O15014 1411 aa13.02□□□□□ -0.32
BEST1-201ENST00000378043 TERF1P54274 439 aa13.02□□□□□ -0.32
BEST1-201ENST00000378043 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.32
BEST1-201ENST00000378043 MPNDQ8N594 471 aa13.02□□□□□ -0.32
BEST1-201ENST00000378043 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.32
BEST1-201ENST00000378043 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.32
BEST1-201ENST00000378043 R3HCC1Q9Y3T6 440 aaKnown RBP13.02□□□□□ -0.32
BEST1-201ENST00000378043 A0A087WZG4 1122 aa13.02□□□□□ -0.33
BEST1-201ENST00000378043 CSB-PGBD3P0DP91 1061 aa13.02□□□□□ -0.33
BEST1-201ENST00000378043 ANKRD1Q15327 319 aa13.02□□□□□ -0.33
BEST1-201ENST00000378043 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
BEST1-201ENST00000378043 ADCY5O95622 1261 aa13.01□□□□□ -0.33
BEST1-201ENST00000378043 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
BEST1-201ENST00000378043 LAMB4A4D0S4 1761 aa13.01□□□□□ -0.33
BEST1-201ENST00000378043 STRCP1A6NGW2 1772 aa13.01□□□□□ -0.33
BEST1-201ENST00000378043 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
BEST1-201ENST00000378043 PTMAP06454 111 aaKnown RBP13.01□□□□□ -0.33
BEST1-201ENST00000378043 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
BEST1-201ENST00000378043 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
BEST1-201ENST00000378043 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
BEST1-201ENST00000378043 LAMA4Q16363 1823 aa13□□□□□ -0.33
BEST1-201ENST00000378043 AP5Z1O43299 807 aa13□□□□□ -0.33
BEST1-201ENST00000378043 RRP9O43818 475 aaKnown RBP13□□□□□ -0.33
BEST1-201ENST00000378043 STK3Q13188 491 aa13□□□□□ -0.33
BEST1-201ENST00000378043 PLBD2Q8NHP8 589 aa13□□□□□ -0.33
BEST1-201ENST00000378043 HAUS7Q99871 368 aa13□□□□□ -0.33
BEST1-201ENST00000378043 ELP1O95163 1332 aa13□□□□□ -0.33
BEST1-201ENST00000378043 KDM4AO75164 1064 aa13□□□□□ -0.33
BEST1-201ENST00000378043 PDCP20941 246 aa13□□□□□ -0.33
BEST1-201ENST00000378043 KRT85P78386 507 aa13□□□□□ -0.33
BEST1-201ENST00000378043 FOXO4P98177 505 aa13□□□□□ -0.33
BEST1-201ENST00000378043 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
BEST1-201ENST00000378043 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
BEST1-201ENST00000378043 ZNF830Q96NB3 372 aaPredicted RBP13□□□□□ -0.33
BEST1-201ENST00000378043 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 CYP21A2P08686 494 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
BEST1-201ENST00000378043 ATF3P18847 181 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 LIG1P18858 919 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 DDX46Q7L014 1031 aaKnown RBP12.99□□□□□ -0.33
BEST1-201ENST00000378043 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
BEST1-201ENST00000378043 RFX7Q2KHR2 1363 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 JAK2O60674 1132 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 CABP4P57796 275 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 NEK1Q96PY6 1258 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
BEST1-201ENST00000378043 H7C1W4 665 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 ATG9AQ7Z3C6 839 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 GTF3C6Q969F1 213 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 TFIP11Q9UBB9 837 aaKnown RBP12.98□□□□□ -0.33
BEST1-201ENST00000378043 PARP4Q9UKK3 1724 aaKnown RBP12.98□□□□□ -0.33
BEST1-201ENST00000378043 KRT32Q14532 448 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 MCMDC2Q4G0Z9 681 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 TJP1Q07157 1748 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
BEST1-201ENST00000378043 STOX1Q6ZVD7 989 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 TTC12Q9H892 705 aaPredicted RBP12.97□□□□□ -0.33
BEST1-201ENST00000378043 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 TNS3Q68CZ2 1445 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 TTLL7Q6ZT98 887 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 Q6ZUG5 572 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 UBE2Q2Q8WVN8 375 aa12.97□□□□□ -0.33
BEST1-201ENST00000378043 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
BEST1-201ENST00000378043 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
BEST1-201ENST00000378043 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.33
BEST1-201ENST00000378043 TIMM10P62072 90 aa12.96□□□□□ -0.33
BEST1-201ENST00000378043 CAMK4Q16566 473 aa12.96□□□□□ -0.33
BEST1-201ENST00000378043 LEO1Q8WVC0 666 aaPredicted RBP12.96□□□□□ -0.33
BEST1-201ENST00000378043 DCCP43146 1447 aa12.96□□□□□ -0.34
BEST1-201ENST00000378043 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.34
BEST1-201ENST00000378043 SCAND2PQ9GZW5 306 aaPredicted RBP12.96□□□□□ -0.34
BEST1-201ENST00000378043 CPDO75976 1380 aa12.96□□□□□ -0.34
BEST1-201ENST00000378043 SPATA31A3Q5VYP0 1347 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
BEST1-201ENST00000378043 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 687.6 ms