RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 RBM17Q96I25 401 aaKnown RBP10.79□□□□□ -0.68
YIPF3-201ENST00000372417 FMNL2Q96PY5 1086 aa10.79□□□□□ -0.68
YIPF3-201ENST00000372417 TRIM17Q9Y577 477 aa10.79□□□□□ -0.68
YIPF3-201ENST00000372417 RGL2O15211 777 aa10.78□□□□□ -0.68
YIPF3-201ENST00000372417 PIP4K2AP48426 406 aaPredicted RBP10.78□□□□□ -0.68
YIPF3-201ENST00000372417 CDCA5Q96FF9 252 aa10.78□□□□□ -0.68
YIPF3-201ENST00000372417 CRAMP1Q96RY5 1269 aa10.78□□□□□ -0.68
YIPF3-201ENST00000372417 NYXQ9GZU5 481 aa10.78□□□□□ -0.68
YIPF3-201ENST00000372417 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
YIPF3-201ENST00000372417 SCN9AQ15858 1988 aa10.77□□□□□ -0.68
YIPF3-201ENST00000372417 TM4SF4P48230 202 aa10.77□□□□□ -0.69
YIPF3-201ENST00000372417 FKBP1BP68106 108 aa10.77□□□□□ -0.69
YIPF3-201ENST00000372417 OTOP1Q7RTM1 612 aa10.77□□□□□ -0.69
YIPF3-201ENST00000372417 NUTM1Q86Y26 1132 aa10.77□□□□□ -0.69
YIPF3-201ENST00000372417 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
YIPF3-201ENST00000372417 CFHR5Q9BXR6 569 aa10.77□□□□□ -0.69
YIPF3-201ENST00000372417 LRRC37AA6NMS7 1700 aa10.77□□□□□ -0.69
YIPF3-201ENST00000372417 PRAMEF22A3QJZ6 481 aa10.76□□□□□ -0.69
YIPF3-201ENST00000372417 KIAA2012Q0VF49 1180 aa10.76□□□□□ -0.69
YIPF3-201ENST00000372417 TEFQ10587 303 aa10.76□□□□□ -0.69
YIPF3-201ENST00000372417 DPF2Q92785 391 aa10.76□□□□□ -0.69
YIPF3-201ENST00000372417 ARMC5Q96C12 935 aa10.76□□□□□ -0.69
YIPF3-201ENST00000372417 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
YIPF3-201ENST00000372417 RTFDC1Q9BY42 306 aaPredicted RBP10.76□□□□□ -0.69
YIPF3-201ENST00000372417 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
YIPF3-201ENST00000372417 LAMA3Q16787 3333 aa10.75□□□□□ -0.69
YIPF3-201ENST00000372417 YDJCA8MPS7 323 aa10.75□□□□□ -0.69
YIPF3-201ENST00000372417 EGFRP00533 1210 aa10.75□□□□□ -0.69
YIPF3-201ENST00000372417 SREBF2Q12772 1141 aa10.75□□□□□ -0.69
YIPF3-201ENST00000372417 MTHFSDQ2M296 383 aaKnown RBP10.75□□□□□ -0.69
YIPF3-201ENST00000372417 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
YIPF3-201ENST00000372417 DPP8Q6V1X1 898 aaPredicted RBP10.75□□□□□ -0.69
YIPF3-201ENST00000372417 R3HDMLQ9H3Y0 253 aa10.75□□□□□ -0.69
YIPF3-201ENST00000372417 GGA3Q9NZ52 723 aa10.75□□□□□ -0.69
YIPF3-201ENST00000372417 ATP6V0A2Q9Y487 856 aa10.75□□□□□ -0.69
YIPF3-201ENST00000372417 ZNF646O15015 1829 aaPredicted RBP10.74□□□□□ -0.69
YIPF3-201ENST00000372417 DUOX1Q9NRD9 1551 aa10.74□□□□□ -0.69
YIPF3-201ENST00000372417 IL13P35225 146 aa10.74□□□□□ -0.69
YIPF3-201ENST00000372417 HLFQ16534 295 aa10.74□□□□□ -0.69
YIPF3-201ENST00000372417 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
YIPF3-201ENST00000372417 PTPN22Q9Y2R2 807 aa10.74□□□□□ -0.69
YIPF3-201ENST00000372417 IBTKQ9P2D0 1353 aaPredicted RBP10.74□□□□□ -0.69
YIPF3-201ENST00000372417 ZNF609O15014 1411 aa10.74□□□□□ -0.69
YIPF3-201ENST00000372417 PSMD14O00487 310 aa10.73□□□□□ -0.69
YIPF3-201ENST00000372417 KIF4BQ2VIQ3 1234 aa10.73□□□□□ -0.69
YIPF3-201ENST00000372417 USP16Q9Y5T5 823 aa10.73□□□□□ -0.69
YIPF3-201ENST00000372417 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
YIPF3-201ENST00000372417 HMOX1P09601 288 aa10.72□□□□□ -0.69
YIPF3-201ENST00000372417 RPS12P25398 132 aaKnown RBP10.72□□□□□ -0.69
YIPF3-201ENST00000372417 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
YIPF3-201ENST00000372417 MPNDQ8N594 471 aa10.72□□□□□ -0.69
YIPF3-201ENST00000372417 ABCC4O15439 1325 aa10.71□□□□□ -0.69
YIPF3-201ENST00000372417 MOB2Q70IA6 237 aa10.71□□□□□ -0.69
YIPF3-201ENST00000372417 ERO1AQ96HE7 468 aa10.71□□□□□ -0.69
YIPF3-201ENST00000372417 SPTBN5Q9NRC6 3674 aaKnown RBP10.7□□□□□ -0.7
YIPF3-201ENST00000372417 VCANP13611 3396 aa10.7□□□□□ -0.7
YIPF3-201ENST00000372417 ASTN2O75129 1339 aaPredicted RBP10.7□□□□□ -0.7
YIPF3-201ENST00000372417 UBE2Q2LH0YL09 131 aa10.7□□□□□ -0.7
YIPF3-201ENST00000372417 SLC4A8Q2Y0W8 1093 aa10.7□□□□□ -0.7
YIPF3-201ENST00000372417 ZNF333Q96JL9 665 aa10.7□□□□□ -0.7
YIPF3-201ENST00000372417 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 KCNQ3O43525 872 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 TTLL12Q14166 644 aaPredicted RBP10.69□□□□□ -0.7
YIPF3-201ENST00000372417 ANGEL2Q5VTE6 544 aaKnown RBP10.69□□□□□ -0.7
YIPF3-201ENST00000372417 NBPF10Q6P3W6 841 aaKnown RBP10.69□□□□□ -0.7
YIPF3-201ENST00000372417 C3orf67Q6ZVT6 689 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 SP8Q8IXZ3 490 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 IL17REQ8NFR9 667 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 CD99L2Q8TCZ2 262 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 DPF3Q92784 378 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 PRO3102Q9H379 93 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 EFCC1Q9HA90 598 aa10.69□□□□□ -0.7
YIPF3-201ENST00000372417 ALPK3Q96L96 1907 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 ZSWIM8A7E2V4 1837 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 A0A1W2PPC1 479 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 BTBD11A6QL63 1104 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 SOX1O00570 391 aaPredicted RBP10.68□□□□□ -0.7
YIPF3-201ENST00000372417 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 MORC1Q86VD1 984 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 LRCH3Q96II8 777 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 DBNDD1Q9H9R9 158 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 ECM29Q5VYK3 1845 aa10.68□□□□□ -0.7
YIPF3-201ENST00000372417 UBN2Q6ZU65 1347 aa10.67□□□□□ -0.7
YIPF3-201ENST00000372417 BBOX1O75936 387 aa10.67□□□□□ -0.7
YIPF3-201ENST00000372417 NTSR2O95665 410 aa10.67□□□□□ -0.7
YIPF3-201ENST00000372417 SNRPA1P09661 255 aaKnown RBP10.67□□□□□ -0.7
YIPF3-201ENST00000372417 GPTP24298 496 aa10.67□□□□□ -0.7
YIPF3-201ENST00000372417 TCIRG1Q13488 830 aa10.67□□□□□ -0.7
YIPF3-201ENST00000372417 SLC9C1Q4G0N8 1177 aa10.67□□□□□ -0.7
YIPF3-201ENST00000372417 RTL9Q8NET4 1388 aa10.66□□□□□ -0.7
YIPF3-201ENST00000372417 ERVV-1B6SEH8 477 aa10.66□□□□□ -0.7
YIPF3-201ENST00000372417 SCARF1Q14162 830 aa10.66□□□□□ -0.7
YIPF3-201ENST00000372417 SUSD4Q5VX71 490 aa10.66□□□□□ -0.7
YIPF3-201ENST00000372417 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
YIPF3-201ENST00000372417 PRDM6Q9NQX0 595 aa10.66□□□□□ -0.7
YIPF3-201ENST00000372417 STXBP5LQ9Y2K9 1186 aa10.66□□□□□ -0.7
YIPF3-201ENST00000372417 CEMIPQ8WUJ3 1361 aa10.65□□□□□ -0.7
YIPF3-201ENST00000372417 MAP3K15Q6ZN16 1313 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms