RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MARCKSP29966 332 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 ARHGAP45Q92619 1136 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 EVI5LQ96CN4 794 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 NEK1Q96PY6 1258 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 MSH6P52701 1360 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 IGHMBP2P38935 993 aaKnown RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 ZNF594Q96JF6 807 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 ORC3Q9UBD5 711 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 PTCH1Q13635 1447 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 C17orf53Q8N3J3 647 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 CCDC47Q96A33 483 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 ZSWIM4Q9H7M6 989 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 LETM1O95202 739 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 ZNF165P49910 485 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 KRT32Q14532 448 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 CCDC183Q5T5S1 534 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 USP26Q9BXU7 913 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 DACT1Q9NYF0 836 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.79e-7■□□□□ 10
SMARCA1-202ENST00000371122 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 PTPRUQ92729 1446 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 FAM89AQ96GI7 184 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 FAM227BQ96M60 508 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 CTNNA3Q9UI47 895 aa10.65□□□□□ -0.7
SMARCA1-202ENST00000371122 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 IGSF3O75054 1194 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 CHMLP26374 656 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 CCDC43Q96MW1 224 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 GNL3LQ9NVN8 582 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 OTUD7BQ6GQQ9 843 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 BICC1Q9H694 974 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 HOXC9P31274 260 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 TFCP2Q12800 502 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 TANGO6Q9C0B7 1094 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 NCOA3Q9Y6Q9 1424 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
SMARCA1-202ENST00000371122 A1BGP04217 495 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 KRT18P05783 430 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ZFYVE27Q5T4F4 411 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NBPF6Q5VWK0 638 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 JMYQ8N9B5 988 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NBPF4Q96M43 638 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CWC25Q9NXE8 425 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ERICH4A6NGS2 130 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 KSR2Q6VAB6 950 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 Q6ZUG5 572 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CDK5RAP3Q96JB5 506 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 RRAGDQ9NQL2 400 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ANKIB1Q9P2G1 1089 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 APOBRQ0VD83 1088 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CLIP2Q9UDT6 1046 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 CD2BP2O95400 341 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 MIGA1Q8NAN2 632 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 USP19O94966 1318 aa10.63□□□□□ -0.71
SMARCA1-202ENST00000371122 NSD2O96028 1365 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 EXOC5O00471 708 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 ZSCAN22P10073 491 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 EPS15P42566 896 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC26A6Q9BXS9 759 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 SCAND2PQ9GZW5 306 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 DNAJC25Q9H1X3 360 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 TOPAZ1Q8N9V7 1692 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 CCAR1Q8IX12 1150 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 FAM193AP78312 1265 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
SMARCA1-202ENST00000371122 ANKRD18BA2A2Z9 1011 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 MPHOSPH10O00566 681 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 GSPT1P15170 499 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC9C2Q5TAH2 1124 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 MKNK2Q9HBH9 465 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 RNF216Q9NWF9 866 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC12A7Q9Y666 1083 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 FAM135BQ49AJ0 1406 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SYT1P21579 422 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 TMEM67Q5HYA8 995 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 SIRT1Q96EB6 747 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 GADD45BO75293 160 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 URI1O94763 535 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms