RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
BRCC3-204ENST00000369462 FAM161AQ3B820 660 aa13.61□□□□□ -0.23
BRCC3-204ENST00000369462 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
BRCC3-204ENST00000369462 SMC5Q8IY18 1101 aa13.61□□□□□ -0.23
BRCC3-204ENST00000369462 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
BRCC3-204ENST00000369462 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
BRCC3-204ENST00000369462 COL24A1Q17RW2 1714 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 APBB1O00213 710 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
BRCC3-204ENST00000369462 SLC16A10Q8TF71 515 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 GCC1Q96CN9 775 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 GREM2Q9H772 168 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 CCDC57Q2TAC2 916 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 NLRP3Q96P20 1036 aa13.6□□□□□ -0.23
BRCC3-204ENST00000369462 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
BRCC3-204ENST00000369462 ZBTB7AO95365 584 aa13.59□□□□□ -0.23
BRCC3-204ENST00000369462 RFX5P48382 616 aaPredicted RBP13.59□□□□□ -0.23
BRCC3-204ENST00000369462 ST5P78524 1137 aa13.59□□□□□ -0.23
BRCC3-204ENST00000369462 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
BRCC3-204ENST00000369462 CCDC152Q4G0S7 254 aa13.59□□□□□ -0.23
BRCC3-204ENST00000369462 BCL11AQ9H165 835 aa13.59□□□□□ -0.23
BRCC3-204ENST00000369462 SIL1Q9H173 461 aa13.59□□□□□ -0.23
BRCC3-204ENST00000369462 ITGA6P23229 1130 aa13.59□□□□□ -0.23
BRCC3-204ENST00000369462 PTPN12Q05209 780 aaKnown RBP13.59□□□□□ -0.23
BRCC3-204ENST00000369462 TPRNQ4KMQ1 711 aa13.58□□□□□ -0.24
BRCC3-204ENST00000369462 ZNF594Q96JF6 807 aaPredicted RBP13.58□□□□□ -0.24
BRCC3-204ENST00000369462 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
BRCC3-204ENST00000369462 COPRSQ9NQ92 184 aa13.58□□□□□ -0.24
BRCC3-204ENST00000369462 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
BRCC3-204ENST00000369462 SF3B3Q15393 1217 aaKnown RBP13.57□□□□□ -0.24
BRCC3-204ENST00000369462 TAF7LQ5H9L4 462 aa13.57□□□□□ -0.24
BRCC3-204ENST00000369462 SEC31BQ9NQW1 1179 aa13.57□□□□□ -0.24
BRCC3-204ENST00000369462 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
BRCC3-204ENST00000369462 DDX60Q8IY21 1712 aaKnown RBP13.57□□□□□ -0.24
BRCC3-204ENST00000369462 ANKRD18BA2A2Z9 1011 aa13.57□□□□□ -0.24
BRCC3-204ENST00000369462 PLCB2Q00722 1185 aa13.57□□□□□ -0.24
BRCC3-204ENST00000369462 SKAP1Q86WV1 359 aa13.57□□□□□ -0.24
BRCC3-204ENST00000369462 PDZRN3Q9UPQ7 1066 aa13.57□□□□□ -0.24
BRCC3-204ENST00000369462 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.24
BRCC3-204ENST00000369462 ATF5Q9Y2D1 282 aaPredicted RBP13.56□□□□□ -0.24
BRCC3-204ENST00000369462 MYH3P11055 1940 aa13.56□□□□□ -0.24
BRCC3-204ENST00000369462 HSP90AB4PQ58FF6 505 aa13.56□□□□□ -0.24
BRCC3-204ENST00000369462 NUCB1Q02818 461 aa13.55□□□□□ -0.24
BRCC3-204ENST00000369462 LNPKQ9C0E8 428 aa13.55□□□□□ -0.24
BRCC3-204ENST00000369462 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
BRCC3-204ENST00000369462 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
BRCC3-204ENST00000369462 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
BRCC3-204ENST00000369462 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
BRCC3-204ENST00000369462 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 LDHAL6AQ6ZMR3 332 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 CHD1LQ86WJ1 897 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 PUS3Q9BZE2 481 aaKnown RBP13.54□□□□□ -0.24
BRCC3-204ENST00000369462 LRRCC1Q9C099 1032 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 RHPN1Q8TCX5 695 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 LAMB2P55268 1798 aa13.54□□□□□ -0.24
BRCC3-204ENST00000369462 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 EYA2O00167 538 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 SASH1O94885 1247 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 DDX46Q7L014 1031 aaKnown RBP13.53□□□□□ -0.24
BRCC3-204ENST00000369462 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
BRCC3-204ENST00000369462 RIC1Q4ADV7 1423 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 ATG9AQ7Z3C6 839 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 RPGRQ92834 1020 aaKnown RBP13.53□□□□□ -0.24
BRCC3-204ENST00000369462 MPHOSPH8Q99549 860 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
BRCC3-204ENST00000369462 TNRC6CQ9HCJ0 1690 aaKnown RBP13.52□□□□□ -0.24
BRCC3-204ENST00000369462 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.24
BRCC3-204ENST00000369462 CELF1Q92879 486 aaKnown RBP13.52□□□□□ -0.24
BRCC3-204ENST00000369462 GOLGB1Q14789 3259 aaKnown RBP13.52□□□□□ -0.25
BRCC3-204ENST00000369462 KLRG2A4D1S0 409 aaPredicted RBP13.52□□□□□ -0.25
BRCC3-204ENST00000369462 POLD1P28340 1107 aa13.52□□□□□ -0.25
BRCC3-204ENST00000369462 PDE6BP35913 854 aa13.52□□□□□ -0.25
BRCC3-204ENST00000369462 IL15P40933 162 aaPredicted RBP13.52□□□□□ -0.25
BRCC3-204ENST00000369462 RGS3P49796 1198 aa13.52□□□□□ -0.25
BRCC3-204ENST00000369462 ANKRD18AQ8IVF6 992 aa13.52□□□□□ -0.25
BRCC3-204ENST00000369462 NRXN2Q9P2S2 1712 aa13.52□□□□□ -0.25
BRCC3-204ENST00000369462 CIAO1O76071 339 aa13.51□□□□□ -0.25
BRCC3-204ENST00000369462 FBXO3Q9UK99 471 aa13.51□□□□□ -0.25
BRCC3-204ENST00000369462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-204ENST00000369462 CASZ1Q86V15 1759 aa13.51□□□□□ -0.25
BRCC3-204ENST00000369462 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-204ENST00000369462 RPS8P62241 208 aaKnown RBP13.51□□□□□ -0.25
BRCC3-204ENST00000369462 TFCP2Q12800 502 aa13.51□□□□□ -0.25
BRCC3-204ENST00000369462 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-204ENST00000369462 RIPOR2Q9Y4F9 1068 aa13.51□□□□□ -0.25
BRCC3-204ENST00000369462 SRGNP10124 158 aa13.5□□□□□ -0.25
BRCC3-204ENST00000369462 PDE4AP27815 886 aa13.5□□□□□ -0.25
BRCC3-204ENST00000369462 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
BRCC3-204ENST00000369462 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
BRCC3-204ENST00000369462 CEP126Q9P2H0 1117 aa13.49□□□□□ -0.25
BRCC3-204ENST00000369462 TAF1P21675 1872 aa13.49□□□□□ -0.25
BRCC3-204ENST00000369462 HOXA10P31260 410 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms