RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ERBB4Q15303 1308 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 SPATA31A5Q5VU36 1347 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 SPATA31A7Q8IWB4 1347 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 SETQ01105 290 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 AGERQ15109 404 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 KIAA1107Q9UPP5 1409 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 CROCC2H7BZ55 1655 aa4.85□□□□□ -1.63
ECHDC1-205ENST00000368295 CACNA1AO00555 2505 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 PTPN23Q9H3S7 1636 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 FBXO45P0C2W1 286 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 MCCD1P59942 119 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 SH3BP2P78314 561 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 EIF4G2P78344 907 aaKnown RBP eCLIP4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 VAC14Q08AM6 782 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 CFDP1Q9UEE9 299 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 RIMS2Q9UQ26 1411 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 NALCNQ8IZF0 1738 aa4.84□□□□□ -1.63
ECHDC1-205ENST00000368295 CTCFP49711 727 aaPredicted RBP4.84□□□□□ -1.64
ECHDC1-205ENST00000368295 KCNA1Q09470 495 aa4.84□□□□□ -1.64
ECHDC1-205ENST00000368295 ESCO1Q5FWF5 840 aa4.84□□□□□ -1.64
ECHDC1-205ENST00000368295 ZBTB33Q86T24 672 aa4.84□□□□□ -1.64
ECHDC1-205ENST00000368295 Q8N3U1 123 aa4.84□□□□□ -1.64
ECHDC1-205ENST00000368295 SLC17A8Q8NDX2 589 aa4.84□□□□□ -1.64
ECHDC1-205ENST00000368295 FOXJ1Q92949 421 aa4.84□□□□□ -1.64
ECHDC1-205ENST00000368295 NRAPQ86VF7 1730 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 LRRIQ1Q96JM4 1722 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 ADGRL2O95490 1459 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 HABP4Q5JVS0 413 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 SH3RF1Q7Z6J0 888 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 SNIP1Q8TAD8 396 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 FAM174AQ8TBP5 190 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 C1QTNF2Q9BXJ5 285 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 CARD14Q9BXL6 1004 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 GOLGA2P5Q9HBQ8 144 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 MBD5Q9P267 1494 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 SZT2Q5T011 3432 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 LMTK2Q8IWU2 1503 aa4.83□□□□□ -1.64
ECHDC1-205ENST00000368295 MAGEB6P1A0A0J9YX57 407 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 POM121CA8CG34 1229 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 SMPD1P17405 629 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 VARSP26640 1264 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 SOX10P56693 466 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 SKOR1P84550 965 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 FSTL1Q12841 308 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 C16orf71Q8IYS4 520 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 ADAM32Q8TC27 787 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 SPATA32Q96LK8 384 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 IGSF5Q9NSI5 407 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 PCDHB9Q9Y5E1 797 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 TECPR2O15040 1411 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 VSIG8P0DPA2 414 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 HSPA8P11142 646 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 SEMA3FQ13275 785 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 PDE3BQ13370 1112 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 ZNF827Q17R98 1081 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 SLC10A4Q96EP9 437 aa4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 CDV3Q9UKY7 258 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-205ENST00000368295 NWD2Q9ULI1 1742 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 NPHP3Q7Z494 1330 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 PRAG1Q86YV5 1406 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 ARHGEF28Q8N1W1 1705 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 WNT7AO00755 349 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 ERFEQ4G0M1 354 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 RC3H1Q5TC82 1133 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 KANK3Q6NY19 840 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 DZIP3Q86Y13 1208 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 TRMT44Q8IYL2 757 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 EHBP1Q8NDI1 1231 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 OCSTAMPQ9BR26 566 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 PRDM16Q9HAZ2 1276 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 NEXMIFQ5QGS0 1516 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 EHBP1L1Q8N3D4 1523 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 SPATA31A3Q5VYP0 1347 aa4.81□□□□□ -1.64
ECHDC1-205ENST00000368295 RPRD2Q5VT52 1461 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 FXR1P51114 621 aaKnown RBP eCLIP4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 TXNRD1Q16881 649 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 C4orf48Q5BLP8 95 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 TEX2Q8IWB9 1127 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 GLMNQ92990 594 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 AIDAQ96BJ3 306 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 CALR3Q96L12 384 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 METP08581 1390 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 TULP4Q9NRJ4 1543 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 PLSCR1O15162 318 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 POLD1P28340 1107 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 VEGFBP49765 207 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 TMED8Q6PL24 325 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 PMFBP1Q8TBY8 1022 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 SPATA31A1Q5TZJ5 1347 aa4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 XRN1Q8IZH2 1706 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-205ENST00000368295 MTUS2Q5JR59 1369 aa4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 PLEKHH2Q8IVE3 1493 aa4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 PTMSP20962 102 aa4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 ALG2Q9H553 416 aa4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 RRAGCQ9HB90 399 aa4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 STRN4Q9NRL3 753 aa4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 MAP4K5Q9Y4K4 846 aa4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 ACIN1Q9UKV3 1341 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-205ENST00000368295 MYO5BQ9ULV0 1848 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms