RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 HSP90AB4PQ58FF6 505 aa16.96■□□□□ 0.3
CSNK1E-201ENST00000359867 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.3
CSNK1E-201ENST00000359867 COL23A1Q86Y22 540 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 PNPLA7Q6ZV29 1317 aa16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 TRIM28Q13263 835 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 SLC15A2Q16348 729 aa16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 KAZALD1Q96I82 304 aa16.95■□□□□ 0.3
CSNK1E-201ENST00000359867 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
CSNK1E-201ENST00000359867 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
CSNK1E-201ENST00000359867 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
CSNK1E-201ENST00000359867 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
CSNK1E-201ENST00000359867 AOX1Q06278 1338 aa16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 SDSP20132 328 aa16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 CASP7P55210 303 aa16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 RBM10P98175 930 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 TRMT112Q9UI30 125 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 H7C1W4 665 aa16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 GYS1P13807 737 aa16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 EPHA10Q5JZY3 1008 aa16.93■□□□□ 0.3
CSNK1E-201ENST00000359867 KIF1BPQ96EK5 621 aa16.92■□□□□ 0.3
CSNK1E-201ENST00000359867 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
CSNK1E-201ENST00000359867 MX1P20591 662 aa16.92■□□□□ 0.3
CSNK1E-201ENST00000359867 NUTM1Q86Y26 1132 aa16.92■□□□□ 0.3
CSNK1E-201ENST00000359867 PDGFDQ9GZP0 370 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-201ENST00000359867 GZF1Q9H116 711 aaPredicted RBP16.91■□□□□ 0.3
CSNK1E-201ENST00000359867 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
CSNK1E-201ENST00000359867 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
CSNK1E-201ENST00000359867 NFIXQ14938 502 aa16.9■□□□□ 0.3
CSNK1E-201ENST00000359867 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
CSNK1E-201ENST00000359867 SETDB2Q96T68 719 aa16.9■□□□□ 0.3
CSNK1E-201ENST00000359867 NTSR2O95665 410 aa16.89■□□□□ 0.29
CSNK1E-201ENST00000359867 PARP10Q53GL7 1025 aa16.89■□□□□ 0.29
CSNK1E-201ENST00000359867 MSL1Q68DK7 614 aa16.89■□□□□ 0.29
CSNK1E-201ENST00000359867 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
CSNK1E-201ENST00000359867 UTP14AQ9BVJ6 771 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-201ENST00000359867 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
CSNK1E-201ENST00000359867 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
CSNK1E-201ENST00000359867 ERC1Q8IUD2 1116 aa16.88■□□□□ 0.29
CSNK1E-201ENST00000359867 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
CSNK1E-201ENST00000359867 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
CSNK1E-201ENST00000359867 IRS4O14654 1257 aaPredicted RBP16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 RGL2O15211 777 aa16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 RRP9O43818 475 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 FOXO4P98177 505 aa16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 LMBR1LQ6UX01 489 aa16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 SNX21Q969T3 373 aa16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 NAP1L5Q96NT1 182 aaPredicted RBP16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 CHMP3Q9Y3E7 222 aa16.87■□□□□ 0.29
CSNK1E-201ENST00000359867 ERFEQ4G0M1 354 aa16.86■□□□□ 0.29
CSNK1E-201ENST00000359867 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
CSNK1E-201ENST00000359867 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-201ENST00000359867 DDR1Q08345 913 aa16.85■□□□□ 0.29
CSNK1E-201ENST00000359867 KLHDC4Q8TBB5 520 aa16.85■□□□□ 0.29
CSNK1E-201ENST00000359867 CARMIL3Q8ND23 1372 aa16.85■□□□□ 0.29
CSNK1E-201ENST00000359867 REC8O95072 547 aa16.85■□□□□ 0.29
CSNK1E-201ENST00000359867 CDHR2Q9BYE9 1310 aa16.85■□□□□ 0.29
CSNK1E-201ENST00000359867 ABCC12Q96J65 1359 aa16.85■□□□□ 0.29
CSNK1E-201ENST00000359867 NPHP1O15259 732 aa16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 QSER1Q2KHR3 1735 aa16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 DDX60Q8IY21 1712 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 HSP90AA1P07900 732 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 TM4SF1P30408 202 aa16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 KIF2CQ99661 725 aa16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-201ENST00000359867 ERC2O15083 957 aa16.83■□□□□ 0.29
CSNK1E-201ENST00000359867 HSCBQ8IWL3 235 aa16.83■□□□□ 0.29
CSNK1E-201ENST00000359867 TTC41PQ6P2S7 1318 aa16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 FGD1P98174 961 aa16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 C3orf67Q6ZVT6 689 aa16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 CLASRPQ8N2M8 674 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 NLGN1Q8N2Q7 840 aa16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 MYH3P11055 1940 aa16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 MCM4P33991 863 aa16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 TPTE2Q6XPS3 522 aa16.83■□□□□ 0.28
CSNK1E-201ENST00000359867 POLRMTO00411 1230 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 PDE8AO60658 829 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 SERPINB2P05120 415 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 MMP10P09238 476 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 CTSWP56202 376 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 R3HDM1Q15032 1099 aaKnown RBP16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 PLA2G12BQ9BX93 195 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 PANK2Q9BZ23 570 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 TSHZ3Q63HK5 1081 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 TTLL11Q8NHH1 800 aa16.82■□□□□ 0.28
CSNK1E-201ENST00000359867 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
CSNK1E-201ENST00000359867 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms