RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TOB2Q14106 344 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-201ENST00000354547 LMBR1LQ6UX01 489 aa23.28■■□□□ 1.32
COL13A1-201ENST00000354547 TTC12Q9H892 705 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-201ENST00000354547 OVOS2A0A0G2JMS6 1433 aa23.28■■□□□ 1.32
COL13A1-201ENST00000354547 PPFIA3O75145 1194 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 HSP90B1P14625 803 aaKnown RBP23.27■■□□□ 1.32
COL13A1-201ENST00000354547 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 CRYBG1Q9Y4K1 1723 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 C17orf53Q8N3J3 647 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-201ENST00000354547 FMNL2Q96PY5 1086 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 MEGF6O75095 1541 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 CSPP1Q1MSJ5 1256 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 DNTTIP2Q5QJE6 756 aaKnown RBP23.27■■□□□ 1.32
COL13A1-201ENST00000354547 FAM184AQ8NB25 1140 aa23.27■■□□□ 1.32
COL13A1-201ENST00000354547 JAK2O60674 1132 aa23.26■■□□□ 1.31
COL13A1-201ENST00000354547 FGD1P98174 961 aa23.26■■□□□ 1.31
COL13A1-201ENST00000354547 DDX11Q96FC9 970 aa23.26■■□□□ 1.31
COL13A1-201ENST00000354547 KRT85P78386 507 aa23.26■■□□□ 1.31
COL13A1-201ENST00000354547 COPRSQ9NQ92 184 aa23.26■■□□□ 1.31
COL13A1-201ENST00000354547 LETM1O95202 739 aaPredicted RBP23.25■■□□□ 1.31
COL13A1-201ENST00000354547 RFX5P48382 616 aaPredicted RBP23.25■■□□□ 1.31
COL13A1-201ENST00000354547 LIG1P18858 919 aa23.25■■□□□ 1.31
COL13A1-201ENST00000354547 COL15A1P39059 1388 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 MED23Q9ULK4 1368 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 GOLGA6L4A6NEF3 574 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 ATP5JP18859 108 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 DCAF5Q96JK2 942 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 NAP1L2Q9ULW6 460 aaPredicted RBP23.24■■□□□ 1.31
COL13A1-201ENST00000354547 PHRF1Q9P1Y6 1649 aaKnown RBP23.24■■□□□ 1.31
COL13A1-201ENST00000354547 TIMM10P62072 90 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 LRP10Q7Z4F1 713 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 CKAP2LQ8IYA6 745 aa23.24■■□□□ 1.31
COL13A1-201ENST00000354547 ZNF330Q9Y3S2 320 aaPredicted RBP23.24■■□□□ 1.31
COL13A1-201ENST00000354547 ANKRD1Q15327 319 aa23.23■■□□□ 1.31
COL13A1-201ENST00000354547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-201ENST00000354547 Q6ZUG5 572 aa23.23■■□□□ 1.31
COL13A1-201ENST00000354547 NEK1Q96PY6 1258 aa23.23■■□□□ 1.31
COL13A1-201ENST00000354547 FAM13BQ9NYF5 915 aa23.23■■□□□ 1.31
COL13A1-201ENST00000354547 KIAA2012Q0VF49 1180 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 SPC24Q8NBT2 197 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 C5P01031 1676 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 UQCRHLA0A096LP55 91 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 GOLIM4O00461 696 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 UQCRHP07919 91 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 MCM5P33992 734 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 CEBPZQ03701 1054 aaKnown RBP23.22■■□□□ 1.31
COL13A1-201ENST00000354547 UVSSAQ2YD98 709 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 PDCP20941 246 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 TTLL7Q6ZT98 887 aa23.22■■□□□ 1.31
COL13A1-201ENST00000354547 KDM4AO75164 1064 aa23.21■■□□□ 1.31
COL13A1-201ENST00000354547 SPATA32Q96LK8 384 aa23.21■■□□□ 1.31
COL13A1-201ENST00000354547 ZBTB3Q9H5J0 574 aa23.21■■□□□ 1.31
COL13A1-201ENST00000354547 RRP9O43818 475 aaKnown RBP23.21■■□□□ 1.31
COL13A1-201ENST00000354547 CYP21A2P08686 494 aa23.21■■□□□ 1.31
COL13A1-201ENST00000354547 ZNF594Q96JF6 807 aaPredicted RBP23.21■■□□□ 1.31
COL13A1-201ENST00000354547 AP5Z1O43299 807 aa23.2■■□□□ 1.3
COL13A1-201ENST00000354547 BRF1Q92994 677 aa23.2■■□□□ 1.3
COL13A1-201ENST00000354547 ARID3AQ99856 593 aa23.2■■□□□ 1.3
COL13A1-201ENST00000354547 HMG20BQ9P0W2 317 aa23.2■■□□□ 1.3
COL13A1-201ENST00000354547 A1BGP04217 495 aa23.19■■□□□ 1.3
COL13A1-201ENST00000354547 SNRKQ9NRH2 765 aa23.19■■□□□ 1.3
COL13A1-201ENST00000354547 DACT1Q9NYF0 836 aa23.19■■□□□ 1.3
COL13A1-201ENST00000354547 ZNF609O15014 1411 aa23.19■■□□□ 1.3
COL13A1-201ENST00000354547 SIPA1L3O60292 1781 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-201ENST00000354547 FUCA2Q9BTY2 467 aa23.19■■□□□ 1.3
COL13A1-201ENST00000354547 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
COL13A1-201ENST00000354547 CCDC85AQ96PX6 553 aaPredicted RBP23.19■■□□□ 1.3
COL13A1-201ENST00000354547 NUP62CLQ9H1M0 184 aa23.19■■□□□ 1.3
COL13A1-201ENST00000354547 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
COL13A1-201ENST00000354547 H3BQV1 296 aa23.18■■□□□ 1.3
COL13A1-201ENST00000354547 IFFO2Q5TF58 517 aa23.18■■□□□ 1.3
COL13A1-201ENST00000354547 NBPF14Q5TI25 921 aa23.18■■□□□ 1.3
COL13A1-201ENST00000354547 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
COL13A1-201ENST00000354547 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
COL13A1-201ENST00000354547 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
COL13A1-201ENST00000354547 CCDC192P0DO97 292 aa23.18■■□□□ 1.3
COL13A1-201ENST00000354547 CHST3Q7LGC8 479 aa23.17■■□□□ 1.3
COL13A1-201ENST00000354547 PLBD2Q8NHP8 589 aa23.17■■□□□ 1.3
COL13A1-201ENST00000354547 RABL6Q3YEC7 729 aaPredicted RBP23.17■■□□□ 1.3
COL13A1-201ENST00000354547 BICD2Q8TD16 824 aa23.17■■□□□ 1.3
COL13A1-201ENST00000354547 HAUS7Q99871 368 aa23.17■■□□□ 1.3
COL13A1-201ENST00000354547 MAP3K11Q16584 847 aa23.16■■□□□ 1.3
COL13A1-201ENST00000354547 TMEM94Q12767 1356 aa23.16■■□□□ 1.3
COL13A1-201ENST00000354547 KRT32Q14532 448 aa23.16■■□□□ 1.3
COL13A1-201ENST00000354547 LRRC24Q50LG9 513 aa23.16■■□□□ 1.3
COL13A1-201ENST00000354547 TNMDQ9H2S6 317 aa23.16■■□□□ 1.3
COL13A1-201ENST00000354547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
COL13A1-201ENST00000354547 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
COL13A1-201ENST00000354547 CCT2P78371 535 aaKnown RBP23.15■■□□□ 1.3
COL13A1-201ENST00000354547 STOX1Q6ZVD7 989 aa23.15■■□□□ 1.3
COL13A1-201ENST00000354547 LUZP1Q86V48 1076 aa23.15■■□□□ 1.3
COL13A1-201ENST00000354547 GTF3C6Q969F1 213 aa23.15■■□□□ 1.3
COL13A1-201ENST00000354547 U3KPZ7 1027 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-201ENST00000354547 USPL1Q5W0Q7 1092 aa23.15■■□□□ 1.3
COL13A1-201ENST00000354547 LEO1Q8WVC0 666 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-201ENST00000354547 CASP7P55210 303 aa23.14■■□□□ 1.29
COL13A1-201ENST00000354547 FOXO4P98177 505 aa23.14■■□□□ 1.29
COL13A1-201ENST00000354547 UBE2Q2Q8WVN8 375 aa23.14■■□□□ 1.29
COL13A1-201ENST00000354547 APOBRQ0VD83 1088 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms