RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 A0A087WZG4 1122 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 AEBP1Q8IUX7 1158 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 MPNDQ8N594 471 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 C2orf69Q8N8R5 385 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 ARMC5Q96C12 935 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 SLC52A2Q9HAB3 445 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 LGR6Q9HBX8 967 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
CD44-205ENST00000352818 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
CD44-205ENST00000352818 OTOP1Q7RTM1 612 aa10.61□□□□□ -0.71
CD44-205ENST00000352818 KRT26Q7Z3Y9 468 aa10.61□□□□□ -0.71
CD44-205ENST00000352818 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
CD44-205ENST00000352818 NIM1KQ8IY84 436 aa10.61□□□□□ -0.71
CD44-205ENST00000352818 VSIG10Q8N0Z9 540 aa10.61□□□□□ -0.71
CD44-205ENST00000352818 FKTNO75072 461 aa10.6□□□□□ -0.71
CD44-205ENST00000352818 CAP1Q01518 475 aa10.6□□□□□ -0.71
CD44-205ENST00000352818 AOC3Q16853 763 aa10.6□□□□□ -0.71
CD44-205ENST00000352818 AMOTQ4VCS5 1084 aa10.6□□□□□ -0.71
CD44-205ENST00000352818 NBPF5PQ86XG9 351 aaPredicted RBP10.6□□□□□ -0.71
CD44-205ENST00000352818 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
CD44-205ENST00000352818 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
CD44-205ENST00000352818 PNNQ9H307 717 aaKnown RBP10.6□□□□□ -0.71
CD44-205ENST00000352818 MRC1P22897 1456 aa10.6□□□□□ -0.71
CD44-205ENST00000352818 EYSQ5T1H1 3165 aa10.6□□□□□ -0.71
CD44-205ENST00000352818 NPHP1O15259 732 aa10.59□□□□□ -0.71
CD44-205ENST00000352818 DIAPH1O60610 1272 aaKnown RBP10.59□□□□□ -0.71
CD44-205ENST00000352818 U2AF1L5P0DN76 240 aaPredicted RBP10.59□□□□□ -0.71
CD44-205ENST00000352818 ALDH1B1P30837 517 aa10.59□□□□□ -0.71
CD44-205ENST00000352818 U2AF1Q01081 240 aaKnown RBP eCLIP10.59□□□□□ -0.71
CD44-205ENST00000352818 CRY2Q49AN0 593 aa10.59□□□□□ -0.71
CD44-205ENST00000352818 PLEKHF1Q96S99 279 aa10.59□□□□□ -0.71
CD44-205ENST00000352818 CFHR5Q9BXR6 569 aa10.59□□□□□ -0.71
CD44-205ENST00000352818 RAPGEFL1Q9UHV5 662 aa10.59□□□□□ -0.71
CD44-205ENST00000352818 CNOT7Q9UIV1 285 aaKnown RBP10.59□□□□□ -0.71
CD44-205ENST00000352818 ZNRF3Q9ULT6 936 aa10.59□□□□□ -0.71
CD44-205ENST00000352818 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
CD44-205ENST00000352818 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.71
CD44-205ENST00000352818 PPIP5K2O43314 1243 aa10.58□□□□□ -0.72
CD44-205ENST00000352818 TM4SF4P48230 202 aa10.58□□□□□ -0.72
CD44-205ENST00000352818 C1orf141Q5JVX7 400 aa10.58□□□□□ -0.72
CD44-205ENST00000352818 CC2D2BQ6DHV5 1058 aa10.58□□□□□ -0.72
CD44-205ENST00000352818 SAMD7Q7Z3H4 446 aa10.58□□□□□ -0.72
CD44-205ENST00000352818 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.58□□□□□ -0.72
CD44-205ENST00000352818 ZNF330Q9Y3S2 320 aaPredicted RBP10.58□□□□□ -0.72
CD44-205ENST00000352818 TRIM17Q9Y577 477 aa10.58□□□□□ -0.72
CD44-205ENST00000352818 ASTN2O75129 1339 aaPredicted RBP10.58□□□□□ -0.72
CD44-205ENST00000352818 RAD17O75943 681 aa10.57□□□□□ -0.72
CD44-205ENST00000352818 A1BGP04217 495 aa10.57□□□□□ -0.72
CD44-205ENST00000352818 IL6STP40189 918 aaPredicted RBP10.57□□□□□ -0.72
CD44-205ENST00000352818 B4GALNT3Q6L9W6 998 aa10.57□□□□□ -0.72
CD44-205ENST00000352818 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
CD44-205ENST00000352818 MICALL2Q8IY33 904 aa10.57□□□□□ -0.72
CD44-205ENST00000352818 IL16Q14005 1332 aa10.57□□□□□ -0.72
CD44-205ENST00000352818 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
CD44-205ENST00000352818 YDJCA8MPS7 323 aa10.56□□□□□ -0.72
CD44-205ENST00000352818 STARD3NLO95772 234 aa10.56□□□□□ -0.72
CD44-205ENST00000352818 CCDC136Q96JN2 1154 aa10.56□□□□□ -0.72
CD44-205ENST00000352818 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
CD44-205ENST00000352818 PTPN22Q9Y2R2 807 aa10.56□□□□□ -0.72
CD44-205ENST00000352818 MAPK8IP3Q9UPT6 1336 aa10.56□□□□□ -0.72
CD44-205ENST00000352818 RNMTO43148 476 aaKnown RBP10.55□□□□□ -0.72
CD44-205ENST00000352818 CT47B1P0C2W7 299 aaPredicted RBP10.55□□□□□ -0.72
CD44-205ENST00000352818 COL9A1P20849 921 aa10.55□□□□□ -0.72
CD44-205ENST00000352818 HOXA10P31260 410 aaPredicted RBP10.55□□□□□ -0.72
CD44-205ENST00000352818 TBC1D10BQ4KMP7 808 aaPredicted RBP10.55□□□□□ -0.72
CD44-205ENST00000352818 Q7L0L9 218 aa10.55□□□□□ -0.72
CD44-205ENST00000352818 EXOC6Q8TAG9 804 aa10.55□□□□□ -0.72
CD44-205ENST00000352818 CDCA5Q96FF9 252 aa10.55□□□□□ -0.72
CD44-205ENST00000352818 ZNF496Q96IT1 587 aaPredicted RBP10.55□□□□□ -0.72
CD44-205ENST00000352818 ZNF333Q96JL9 665 aa10.55□□□□□ -0.72
CD44-205ENST00000352818 BCL2L13Q9BXK5 485 aa10.55□□□□□ -0.72
CD44-205ENST00000352818 STXBP5LQ9Y2K9 1186 aa10.55□□□□□ -0.72
CD44-205ENST00000352818 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
CD44-205ENST00000352818 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
CD44-205ENST00000352818 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
CD44-205ENST00000352818 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
CD44-205ENST00000352818 RSPH6AQ9H0K4 717 aa10.54□□□□□ -0.72
CD44-205ENST00000352818 MYH16Q9H6N6 1097 aa10.54□□□□□ -0.72
CD44-205ENST00000352818 UBR2Q8IWV8 1755 aa10.53□□□□□ -0.72
CD44-205ENST00000352818 WTIPA6NIX2 430 aaPredicted RBP10.53□□□□□ -0.72
CD44-205ENST00000352818 FAM177BA6PVY3 158 aa10.53□□□□□ -0.72
CD44-205ENST00000352818 TCERG1O14776 1098 aaKnown RBP10.53□□□□□ -0.72
CD44-205ENST00000352818 U2SURPO15042 1029 aaKnown RBP10.53□□□□□ -0.72
CD44-205ENST00000352818 IL13P35225 146 aa10.53□□□□□ -0.72
CD44-205ENST00000352818 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
CD44-205ENST00000352818 PIP4K2AP48426 406 aaPredicted RBP10.53□□□□□ -0.72
CD44-205ENST00000352818 TPTE2Q6XPS3 522 aa10.53□□□□□ -0.72
CD44-205ENST00000352818 RTFDC1Q9BY42 306 aaPredicted RBP10.53□□□□□ -0.72
CD44-205ENST00000352818 RIC1Q4ADV7 1423 aa10.52□□□□□ -0.73
CD44-205ENST00000352818 H7C1D1 291 aa10.52□□□□□ -0.73
CD44-205ENST00000352818 CLEC4GQ6UXB4 293 aa10.52□□□□□ -0.73
CD44-205ENST00000352818 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
CD44-205ENST00000352818 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
CD44-205ENST00000352818 ZNF609O15014 1411 aa10.51□□□□□ -0.73
CD44-205ENST00000352818 DLG5Q8TDM6 1919 aa10.51□□□□□ -0.73
CD44-205ENST00000352818 PRAMEF22A3QJZ6 481 aa10.51□□□□□ -0.73
CD44-205ENST00000352818 UBE2Q2LH0YL09 131 aa10.51□□□□□ -0.73
CD44-205ENST00000352818 PPEF1O14829 653 aaPredicted RBP10.51□□□□□ -0.73
CD44-205ENST00000352818 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms