RNA–Protein interactions for RNA: ENST00000330149.9

TRAPPC6B-201, Transcript of trafficking protein particle complex 6B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,242 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-201ENST00000330149 BECN1Q14457 450 aa7.22□□□□□ -1.25
TRAPPC6B-201ENST00000330149 AMOTQ4VCS5 1084 aa7.22□□□□□ -1.25
TRAPPC6B-201ENST00000330149 ANKRD26Q9UPS8 1709 aa7.21□□□□□ -1.25
TRAPPC6B-201ENST00000330149 EVI5LQ96CN4 794 aa7.21□□□□□ -1.26
TRAPPC6B-201ENST00000330149 BRIP1Q9BX63 1249 aa7.21□□□□□ -1.26
TRAPPC6B-201ENST00000330149 GJA3Q9Y6H8 435 aa7.21□□□□□ -1.26
TRAPPC6B-201ENST00000330149 RFX1P22670 979 aa7.21□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CNBD1Q8NA66 436 aa7.21□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CAPNS2Q96L46 248 aa7.21□□□□□ -1.26
TRAPPC6B-201ENST00000330149 GPR101Q96P66 508 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC6B-201ENST00000330149 FER1L6Q2WGJ9 1857 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 DLEC1Q9Y238 1755 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 ZNF831Q5JPB2 1677 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 RASSF10A6NK89 507 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 PER1O15534 1290 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 A1BGP04217 495 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SRGNP10124 158 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 BEGAINQ9BUH8 593 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 HACL1Q9UJ83 578 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 EIF5P55010 431 aaKnown RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 L1TD1Q5T7N2 865 aaKnown RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 UPF2Q9HAU5 1272 aaKnown RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 HMGB1P09429 215 aaKnown RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 MAP2K1Q02750 393 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 ZNF496Q96IT1 587 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 MCOLN1Q9GZU1 580 aa7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 PNNQ9H307 717 aaKnown RBP7.2□□□□□ -1.26
TRAPPC6B-201ENST00000330149 RNMTO43148 476 aaKnown RBP7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SOX10P56693 466 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CDCA8Q53HL2 280 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SETDB2Q96T68 719 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 DDX21Q9NR30 783 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 BCCIPQ9P287 314 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 NRXN2Q9P2S2 1712 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 DICER1Q9UPY3 1922 aaKnown RBP7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 COL6A3P12111 3177 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 EPS15P42566 896 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 DLK2Q6UY11 383 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 L3MBTL3Q96JM7 780 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 ZNF408Q9H9D4 720 aa7.19□□□□□ -1.26
TRAPPC6B-201ENST00000330149 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 VIRMAQ69YN4 1812 aaKnown RBP7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 PRAMEF22A3QJZ6 481 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 MKRN4PQ13434 485 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 MTHFSDQ2M296 383 aaKnown RBP7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CST9Q5W186 159 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CNKSR1Q969H4 720 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 ZIC5Q96T25 663 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CHMP4BQ9H444 224 aaKnown RBP7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 POLA2Q14181 598 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 C8orf34Q49A92 452 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 AKAP4Q5JQC9 854 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 NOL8Q76FK4 1167 aaKnown RBP7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 PANK3Q9H999 370 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 KCNQ3O43525 872 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 STARD3NLO95772 234 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 MORC1Q86VD1 984 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 NBPF5PQ86XG9 351 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 TTC5Q8N0Z6 440 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 C7orf43Q8WVR3 580 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 MASTLQ96GX5 879 aa7.18□□□□□ -1.26
TRAPPC6B-201ENST00000330149 HSP90AA1P07900 732 aaKnown RBP7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 DGKZQ13574 1117 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CCDC93Q567U6 631 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 PCDH10Q9P2E7 1040 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 LTBP3Q9NS15 1303 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SCN11AQ9UI33 1791 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 IL13P35225 146 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 RGS19P49795 217 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 ST5P78524 1137 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 HSP90AA2PQ14568 343 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 NPC1L1Q9UHC9 1359 aa7.17□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CEP290O15078 2479 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 GOLGA6L3A6NEY3 463 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 GOLGA2Q08379 1002 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 ADAMTS8Q9UP79 889 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CAMTA2O94983 1202 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SCNN1AP37088 669 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 FKBP4Q02790 459 aaKnown RBP eCLIP7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 CIAPIN1Q6FI81 312 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 STYK1Q6J9G0 422 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 PNMA8AQ86V59 439 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 DZIP3Q86Y13 1208 aaKnown RBP7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SYNE4Q8N205 404 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 COL4A5P29400 1685 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 NCLP19338 710 aaKnown RBP7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 IARSP41252 1262 aaKnown RBP7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SGSM3Q96HU1 749 aa7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 RRAGDQ9NQL2 400 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SCN4AP35499 1836 aa7.15□□□□□ -1.26
TRAPPC6B-201ENST00000330149 SCNN1DP51172 638 aa7.15□□□□□ -1.26
TRAPPC6B-201ENST00000330149 NUTM1Q86Y26 1132 aa7.15□□□□□ -1.26
TRAPPC6B-201ENST00000330149 GLIS2Q9BZE0 524 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC6B-201ENST00000330149 USP16Q9Y5T5 823 aa7.15□□□□□ -1.26
TRAPPC6B-201ENST00000330149 FZD9O00144 591 aa7.15□□□□□ -1.27
TRAPPC6B-201ENST00000330149 CELF2O95319 508 aaKnown RBP7.15□□□□□ -1.27
TRAPPC6B-201ENST00000330149 RBM26Q5T8P6 1007 aaKnown RBP7.15□□□□□ -1.27
TRAPPC6B-201ENST00000330149 ZNF790Q6PG37 636 aa7.15□□□□□ -1.27
TRAPPC6B-201ENST00000330149 CCDC146Q8IYE0 955 aa7.15□□□□□ -1.27
TRAPPC6B-201ENST00000330149 NGEFQ8N5V2 710 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms