RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 KIF26AQ9ULI4 1882 aaPredicted RBP3.35□□□□□ -1.87
RGPD6-201ENST00000329516 MYO16Q9Y6X6 1858 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 CCDC189A1A4V9 331 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 CDC27P30260 824 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 TMEM57Q8N5G2 664 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 SPATA20Q8TB22 786 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 KCNMB3Q9NPA1 279 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 NENFQ9UMX5 172 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 DCTPP1Q9H773 170 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 MCM3APO60318 1980 aa3.35□□□□□ -1.87
RGPD6-201ENST00000329516 CLCN1P35523 988 aa3.34□□□□□ -1.87
RGPD6-201ENST00000329516 FAM50AQ14320 339 aaKnown RBP3.34□□□□□ -1.87
RGPD6-201ENST00000329516 DNAH9Q9NYC9 4486 aa3.34□□□□□ -1.87
RGPD6-201ENST00000329516 NECTIN1Q15223 517 aa3.34□□□□□ -1.87
RGPD6-201ENST00000329516 NOP58Q9Y2X3 529 aaKnown RBP3.34□□□□□ -1.87
RGPD6-201ENST00000329516 NBPF7P0C2Y1 421 aaPredicted RBP3.34□□□□□ -1.87
RGPD6-201ENST00000329516 CCDC142Q17RM4 750 aa3.34□□□□□ -1.87
RGPD6-201ENST00000329516 ATG9AQ7Z3C6 839 aa3.34□□□□□ -1.87
RGPD6-201ENST00000329516 REXO1L1PQ8IX06 675 aa3.34□□□□□ -1.87
RGPD6-201ENST00000329516 TMX1Q9H3N1 280 aa3.34□□□□□ -1.88
RGPD6-201ENST00000329516 HPS5Q9UPZ3 1129 aa3.34□□□□□ -1.88
RGPD6-201ENST00000329516 CTIFO43310 598 aaKnown RBP3.34□□□□□ -1.88
RGPD6-201ENST00000329516 MBD3O95983 291 aa3.34□□□□□ -1.88
RGPD6-201ENST00000329516 RGS3P49796 1198 aa3.34□□□□□ -1.88
RGPD6-201ENST00000329516 FLT4P35916 1363 aa3.34□□□□□ -1.88
RGPD6-201ENST00000329516 CYP27B1O15528 508 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 TOB2Q14106 344 aaPredicted RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 CEP85Q6P2H3 762 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 KRI1Q8N9T8 703 aaKnown RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 CRAMP1Q96RY5 1269 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 ESF1Q9H501 851 aaKnown RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 COL4A3Q01955 1670 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 FECHP22830 423 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 MDM2Q00987 491 aaPredicted RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 EARS2Q5JPH6 523 aaKnown RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 RSPH4AQ5TD94 716 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 TNFRSF25Q93038 417 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 CHD6Q8TD26 2715 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 SHROOM3Q8TF72 1996 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 PLEKHD1A6NEE1 506 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 PTPN12Q05209 780 aaKnown RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 NPM2Q86SE8 214 aaKnown RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 BCL11BQ9C0K0 894 aaPredicted RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 LGR6Q9HBX8 967 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 TENM1Q9UKZ4 2725 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 GNAI3P08754 354 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 CHMP4BP1P59074 171 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 RBSNQ9H1K0 784 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 BCAS3Q9H6U6 928 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 TNRQ92752 1358 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 SLFN14P0C7P3 912 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 NTRK3Q16288 839 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 NOM1Q5C9Z4 860 aaKnown RBP3.33□□□□□ -1.88
RGPD6-201ENST00000329516 IRF2BP1Q8IU81 584 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 EYA1Q99502 592 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 TTC21AQ8NDW8 1320 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 TRIP11Q15643 1979 aa3.33□□□□□ -1.88
RGPD6-201ENST00000329516 IQCB1Q15051 598 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 RABL6Q3YEC7 729 aaPredicted RBP3.32□□□□□ -1.88
RGPD6-201ENST00000329516 THSD7BQ9C0I4 1608 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 ALPK3Q96L96 1907 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 A0A087X0B3 334 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 TRIM65Q6PJ69 517 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 CCDC146Q8IYE0 955 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 PIAS4Q8N2W9 510 aaPredicted RBP3.32□□□□□ -1.88
RGPD6-201ENST00000329516 LSG1Q9H089 658 aaKnown RBP3.32□□□□□ -1.88
RGPD6-201ENST00000329516 PTPRDP23468 1912 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 MS4A1P11836 297 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 KCNJ4P48050 445 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 MEIS3Q99687 375 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 BTBD7Q9P203 1132 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 CPDO75976 1380 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 GADD45BO75293 160 aaPredicted RBP3.32□□□□□ -1.88
RGPD6-201ENST00000329516 SCARF1Q14162 830 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 MTHFSDQ2M296 383 aaKnown RBP3.32□□□□□ -1.88
RGPD6-201ENST00000329516 PGBD1Q96JS3 809 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 TM4SF1P30408 202 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 CCDC144BQ3MJ40 725 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 BEND3Q5T5X7 828 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 C3orf67Q6ZVT6 689 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 CCDC144CPQ8IYA2 1237 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 RCAN3Q9UKA8 241 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 FRMPD3Q5JV73 1810 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 POTEJP0CG39 1038 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 ANTXR2P58335 489 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 PDE3AQ14432 1141 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 KIF24Q5T7B8 1368 aa3.32□□□□□ -1.88
RGPD6-201ENST00000329516 ZDHHC14Q8IZN3 488 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 TMEM87AQ8NBN3 555 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 TTC16Q8NEE8 873 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 CABP2Q9NPB3 220 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 A0A087WWV3 80 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 FAM237AA0A1B0GTK4 181 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 FBXL16Q8N461 479 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 SNX21Q969T3 373 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 ST7Q9NRC1 585 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 SPTLC3Q9NUV7 552 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 RALGAPA2Q2PPJ7 1873 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 BRD1O95696 1058 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 PBX1P40424 430 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms