RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 SLFN5Q08AF3 891 aa12.1□□□□□ -0.47
KARS-202ENST00000319410 DUSP27Q5VZP5 1158 aa12.1□□□□□ -0.47
KARS-202ENST00000319410 TRMT2AQ8IZ69 625 aaKnown RBP12.1□□□□□ -0.47
KARS-202ENST00000319410 KIF3CO14782 793 aa12.09□□□□□ -0.47
KARS-202ENST00000319410 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
KARS-202ENST00000319410 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
KARS-202ENST00000319410 CACNA1SQ13698 1873 aa12.09□□□□□ -0.47
KARS-202ENST00000319410 GPTP24298 496 aa12.09□□□□□ -0.47
KARS-202ENST00000319410 PANK2Q9BZ23 570 aa12.09□□□□□ -0.47
KARS-202ENST00000319410 NFKBIEO00221 500 aa12.08□□□□□ -0.48
KARS-202ENST00000319410 MCCP23508 829 aa12.08□□□□□ -0.48
KARS-202ENST00000319410 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
KARS-202ENST00000319410 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.08□□□□□ -0.48
KARS-202ENST00000319410 SBF1O95248 1867 aa12.08□□□□□ -0.48
KARS-202ENST00000319410 SRGNP10124 158 aa12.08□□□□□ -0.48
KARS-202ENST00000319410 C8orf58Q8NAV2 365 aa12.08□□□□□ -0.48
KARS-202ENST00000319410 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
KARS-202ENST00000319410 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
KARS-202ENST00000319410 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
KARS-202ENST00000319410 GEMIN8Q9NWZ8 242 aaKnown RBP12.08□□□□□ -0.48
KARS-202ENST00000319410 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
KARS-202ENST00000319410 DBF4Q9UBU7 674 aaPredicted RBP12.07□□□□□ -0.48
KARS-202ENST00000319410 MAP3K15Q6ZN16 1313 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
KARS-202ENST00000319410 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
KARS-202ENST00000319410 PDIA6Q15084 440 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 HDGFL1Q5TGJ6 251 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 PRPF40BQ6NWY9 871 aaKnown RBP12.07□□□□□ -0.48
KARS-202ENST00000319410 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
KARS-202ENST00000319410 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
KARS-202ENST00000319410 TWISTNBQ3B726 338 aaPredicted RBP12.06□□□□□ -0.48
KARS-202ENST00000319410 NUP98P52948 1817 aa12.06□□□□□ -0.48
KARS-202ENST00000319410 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
KARS-202ENST00000319410 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
KARS-202ENST00000319410 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
KARS-202ENST00000319410 MASTLQ96GX5 879 aa12.06□□□□□ -0.48
KARS-202ENST00000319410 HYPKQ9NX55 129 aa12.06□□□□□ -0.48
KARS-202ENST00000319410 CGNQ9P2M7 1197 aaKnown RBP12.06□□□□□ -0.48
KARS-202ENST00000319410 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
KARS-202ENST00000319410 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 LMNB1P20700 586 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
KARS-202ENST00000319410 EXOSC9Q06265 439 aaKnown RBP12.05□□□□□ -0.48
KARS-202ENST00000319410 ERFEQ4G0M1 354 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 TNRC6CQ9HCJ0 1690 aaKnown RBP12.05□□□□□ -0.48
KARS-202ENST00000319410 VAMP4O75379 141 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 SUSD4Q5VX71 490 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 STYK1Q6J9G0 422 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 TSPYL6Q8N831 410 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 RRAGCQ9HB90 399 aa12.05□□□□□ -0.48
KARS-202ENST00000319410 UQCRHLA0A096LP55 91 aa12.04□□□□□ -0.48
KARS-202ENST00000319410 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
KARS-202ENST00000319410 UQCRHP07919 91 aa12.04□□□□□ -0.48
KARS-202ENST00000319410 SLC51AQ86UW1 340 aa12.04□□□□□ -0.48
KARS-202ENST00000319410 ZSCAN30Q86W11 494 aa12.04□□□□□ -0.48
KARS-202ENST00000319410 CNKSR1Q969H4 720 aa12.04□□□□□ -0.48
KARS-202ENST00000319410 MSNP26038 577 aaKnown RBP12.03□□□□□ -0.48
KARS-202ENST00000319410 GRPEL1Q9HAV7 217 aa12.03□□□□□ -0.48
KARS-202ENST00000319410 HMGB1P09429 215 aaKnown RBP12.03□□□□□ -0.48
KARS-202ENST00000319410 COPS6Q7L5N1 327 aa12.03□□□□□ -0.48
KARS-202ENST00000319410 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
KARS-202ENST00000319410 TSPYL1Q9H0U9 437 aa12.03□□□□□ -0.48
KARS-202ENST00000319410 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
KARS-202ENST00000319410 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
KARS-202ENST00000319410 ELL2O00472 640 aaPredicted RBP12.02□□□□□ -0.48
KARS-202ENST00000319410 NPR1P16066 1061 aa12.02□□□□□ -0.48
KARS-202ENST00000319410 GIGYF2Q6Y7W6 1299 aaKnown RBP12.02□□□□□ -0.48
KARS-202ENST00000319410 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.48
KARS-202ENST00000319410 STK31Q9BXU1 1019 aa12.02□□□□□ -0.48
KARS-202ENST00000319410 TIAM2Q8IVF5 1701 aa12.02□□□□□ -0.48
KARS-202ENST00000319410 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
KARS-202ENST00000319410 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.49
KARS-202ENST00000319410 CLSTN1O94985 981 aa12.02□□□□□ -0.49
KARS-202ENST00000319410 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
KARS-202ENST00000319410 ZNF34Q8IZ26 560 aa12.02□□□□□ -0.49
KARS-202ENST00000319410 PLCD4Q9BRC7 762 aa12.02□□□□□ -0.49
KARS-202ENST00000319410 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.49
KARS-202ENST00000319410 R3HCC1Q9Y3T6 440 aaKnown RBP12.02□□□□□ -0.49
KARS-202ENST00000319410 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
KARS-202ENST00000319410 TOMM70O94826 608 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 ZBTB22O15209 634 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 NTSR2O95665 410 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 HSPA6P17066 643 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 BECN1Q14457 450 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 SYNE4Q8N205 404 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 NYXQ9GZU5 481 aa12.01□□□□□ -0.49
KARS-202ENST00000319410 C16orf71Q8IYS4 520 aaPredicted RBP12□□□□□ -0.49
KARS-202ENST00000319410 ARFGEF2Q9Y6D5 1785 aa12□□□□□ -0.49
KARS-202ENST00000319410 CSPP1Q1MSJ5 1256 aa12□□□□□ -0.49
KARS-202ENST00000319410 ALDH1L2Q3SY69 923 aa12□□□□□ -0.49
KARS-202ENST00000319410 HSP90AB3PQ58FF7 597 aa12□□□□□ -0.49
KARS-202ENST00000319410 CEP120Q8N960 986 aa12□□□□□ -0.49
KARS-202ENST00000319410 PLBD2Q8NHP8 589 aa12□□□□□ -0.49
KARS-202ENST00000319410 ZNF277Q9NRM2 450 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms