RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 SH2B1Q9NRF2 756 aaPredicted RBP18.74■□□□□ 0.59
TSC22D3-201ENST00000315660 ATG9AQ7Z3C6 839 aa18.73■□□□□ 0.59
TSC22D3-201ENST00000315660 ZNF589Q86UQ0 364 aaPredicted RBP18.73■□□□□ 0.59
TSC22D3-201ENST00000315660 SMC3Q9UQE7 1217 aa18.73■□□□□ 0.59
TSC22D3-201ENST00000315660 JCADQ9P266 1359 aa18.73■□□□□ 0.59
TSC22D3-201ENST00000315660 LARGE1O95461 756 aa18.73■□□□□ 0.59
TSC22D3-201ENST00000315660 ANP32BQ92688 251 aaKnown RBP18.73■□□□□ 0.59
TSC22D3-201ENST00000315660 RFX7Q2KHR2 1363 aa18.73■□□□□ 0.59
TSC22D3-201ENST00000315660 HAUS7Q99871 368 aa18.72■□□□□ 0.59
TSC22D3-201ENST00000315660 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
TSC22D3-201ENST00000315660 DNAJC2Q99543 621 aaKnown RBP18.72■□□□□ 0.59
TSC22D3-201ENST00000315660 ISCA1Q9BUE6 129 aa18.72■□□□□ 0.59
TSC22D3-201ENST00000315660 NDUFB9Q9Y6M9 179 aa18.72■□□□□ 0.59
TSC22D3-201ENST00000315660 PIGBQ92521 554 aa18.71■□□□□ 0.59
TSC22D3-201ENST00000315660 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
TSC22D3-201ENST00000315660 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
TSC22D3-201ENST00000315660 HMG20BQ9P0W2 317 aa18.71■□□□□ 0.59
TSC22D3-201ENST00000315660 RBM27Q9P2N5 1060 aaKnown RBP18.71■□□□□ 0.59
TSC22D3-201ENST00000315660 TAF5LO75529 589 aa18.7■□□□□ 0.58
TSC22D3-201ENST00000315660 IL15P40933 162 aaPredicted RBP18.7■□□□□ 0.58
TSC22D3-201ENST00000315660 GPR108Q9NPR9 543 aa18.7■□□□□ 0.58
TSC22D3-201ENST00000315660 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
TSC22D3-201ENST00000315660 CCDC83Q8IWF9 413 aa18.7■□□□□ 0.58
TSC22D3-201ENST00000315660 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
TSC22D3-201ENST00000315660 EYA2O00167 538 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 STX6O43752 255 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 TCIRG1Q13488 830 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 ANKRD1Q15327 319 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 DNAJC10Q8IXB1 793 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 VSIG10Q8N0Z9 540 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 ATP6V1DQ9Y5K8 247 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 ZSCAN22P10073 491 aaPredicted RBP18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 SYT1P21579 422 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
TSC22D3-201ENST00000315660 ZNF609O15014 1411 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 ME3Q16798 604 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 TSGA10IPQ3SY00 556 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 FOXD4L6Q3SYB3 417 aaPredicted RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 LRRC24Q50LG9 513 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 USPL1Q5W0Q7 1092 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 FOXD4L3Q6VB84 417 aaPredicted RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 DDX46Q7L014 1031 aaKnown RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 ZNF594Q96JF6 807 aaPredicted RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 NEUROD6Q96NK8 337 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 TMEM63CQ9P1W3 806 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 ZNF330Q9Y3S2 320 aaPredicted RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 TAF6LQ9Y6J9 622 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 ST3GAL1Q11201 340 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 KRT32Q14532 448 aa18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 SYAP1Q96A49 352 aaPredicted RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
TSC22D3-201ENST00000315660 RRP9O43818 475 aaKnown RBP18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 CIAO1O76071 339 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 STARD3NLO95772 234 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 CHGBP05060 677 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 TIMM10P62072 90 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 TRIM28Q13263 835 aaKnown RBP18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 KIF6Q6ZMV9 814 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 KBTBD3Q8NAB2 608 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 TPCN1Q9ULQ1 816 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 DISP2A7MBM2 1401 aa18.67■□□□□ 0.58
TSC22D3-201ENST00000315660 GJB2P29033 226 aa18.66■□□□□ 0.58
TSC22D3-201ENST00000315660 PDIA4P13667 645 aaKnown RBP18.66■□□□□ 0.58
TSC22D3-201ENST00000315660 RPS6KB1P23443 525 aa18.66■□□□□ 0.58
TSC22D3-201ENST00000315660 MCMDC2Q4G0Z9 681 aa18.66■□□□□ 0.58
TSC22D3-201ENST00000315660 TICAM2Q86XR7 235 aa18.66■□□□□ 0.58
TSC22D3-201ENST00000315660 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
TSC22D3-201ENST00000315660 HSP90AA2PQ14568 343 aaPredicted RBP18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 CCDC129Q6ZRS4 1044 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 ZSCAN30Q86W11 494 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 SEC62Q99442 399 aaKnown RBP18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 PALLDQ8WX93 1383 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 USP48Q86UV5 1035 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 NECAB1Q8N987 351 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 PUS3Q9BZE2 481 aaKnown RBP18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 PAG1Q9NWQ8 432 aa18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
TSC22D3-201ENST00000315660 F13A1P00488 732 aa18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 TMEM87AQ8NBN3 555 aa18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 COL14A1Q05707 1796 aaKnown RBP18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 GOLIM4O00461 696 aa18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 PCCAP05165 728 aaPredicted RBP18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 TPM2P07951 284 aa18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 PRIM1P49642 420 aaKnown RBP18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 LRSAM1Q6UWE0 723 aa18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 TCEANC2Q96MN5 208 aa18.64■□□□□ 0.57
TSC22D3-201ENST00000315660 A0A1B0GUL7 405 aa18.63■□□□□ 0.57
TSC22D3-201ENST00000315660 GADD45BO75293 160 aaPredicted RBP18.63■□□□□ 0.57
TSC22D3-201ENST00000315660 ITGB4P16144 1822 aa18.63■□□□□ 0.57
TSC22D3-201ENST00000315660 PHF14O94880 888 aa18.62■□□□□ 0.57
TSC22D3-201ENST00000315660 TOB2Q14106 344 aaPredicted RBP18.62■□□□□ 0.57
TSC22D3-201ENST00000315660 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
TSC22D3-201ENST00000315660 PLA2G12BQ9BX93 195 aa18.62■□□□□ 0.57
TSC22D3-201ENST00000315660 CEP126Q9P2H0 1117 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms