RNA–Protein interactions for RNA: ENST00000314423.11

UTP4-201, Transcript of UTP4, small subunit processome component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UTP4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-201ENST00000314423 ATG3Q9NT62 314 aa23.64■■□□□ 1.38
UTP4-201ENST00000314423 IL15P40933 162 aaPredicted RBP23.64■■□□□ 1.37
UTP4-201ENST00000314423 TCIRG1Q13488 830 aa23.64■■□□□ 1.37
UTP4-201ENST00000314423 ZSCAN23Q3MJ62 389 aa23.64■■□□□ 1.37
UTP4-201ENST00000314423 RNF20Q5VTR2 975 aa23.64■■□□□ 1.37
UTP4-201ENST00000314423 VSIG10Q8N0Z9 540 aa23.64■■□□□ 1.37
UTP4-201ENST00000314423 ZNF594Q96JF6 807 aaPredicted RBP23.64■■□□□ 1.37
UTP4-201ENST00000314423 NEUROD6Q96NK8 337 aa23.64■■□□□ 1.37
UTP4-201ENST00000314423 JCADQ9P266 1359 aa23.64■■□□□ 1.37
UTP4-201ENST00000314423 TAF5LO75529 589 aa23.63■■□□□ 1.37
UTP4-201ENST00000314423 LRRC24Q50LG9 513 aa23.63■■□□□ 1.37
UTP4-201ENST00000314423 TEX13AQ9BXU3 409 aaPredicted RBP23.63■■□□□ 1.37
UTP4-201ENST00000314423 FOXD4L6Q3SYB3 417 aaPredicted RBP23.62■■□□□ 1.37
UTP4-201ENST00000314423 FOXD4L3Q6VB84 417 aaPredicted RBP23.62■■□□□ 1.37
UTP4-201ENST00000314423 DDX46Q7L014 1031 aaKnown RBP23.62■■□□□ 1.37
UTP4-201ENST00000314423 RFX7Q2KHR2 1363 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 EYA2O00167 538 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 CHGBP05060 677 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 PSMA5P28066 241 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 ZNF445P59923 1031 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 COL9A3Q14050 684 aaPredicted RBP23.62■■□□□ 1.37
UTP4-201ENST00000314423 CCDC83Q8IWF9 413 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 SMC3Q9UQE7 1217 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 TAF6LQ9Y6J9 622 aa23.62■■□□□ 1.37
UTP4-201ENST00000314423 TIMM10P62072 90 aa23.61■■□□□ 1.37
UTP4-201ENST00000314423 ZSCAN31Q96LW9 406 aaPredicted RBP23.61■■□□□ 1.37
UTP4-201ENST00000314423 GPR108Q9NPR9 543 aa23.61■■□□□ 1.37
UTP4-201ENST00000314423 SH2B1Q9NRF2 756 aaPredicted RBP23.61■■□□□ 1.37
UTP4-201ENST00000314423 RBM27Q9P2N5 1060 aaKnown RBP23.61■■□□□ 1.37
UTP4-201ENST00000314423 GLIPR1L2Q4G1C9 344 aa23.61■■□□□ 1.37
UTP4-201ENST00000314423 KIF6Q6ZMV9 814 aa23.61■■□□□ 1.37
UTP4-201ENST00000314423 PODXL2Q9NZ53 605 aa23.61■■□□□ 1.37
UTP4-201ENST00000314423 NSFL1CQ9UNZ2 370 aaKnown RBP23.61■■□□□ 1.37
UTP4-201ENST00000314423 STARD3NLO95772 234 aa23.6■■□□□ 1.37
UTP4-201ENST00000314423 DISP2A7MBM2 1401 aa23.6■■□□□ 1.37
UTP4-201ENST00000314423 ZNF609O15014 1411 aa23.6■■□□□ 1.37
UTP4-201ENST00000314423 SYT1P21579 422 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 ME3Q16798 604 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 FAM43AQ8N2R8 423 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 SEC62Q99442 399 aaKnown RBP23.59■■□□□ 1.37
UTP4-201ENST00000314423 HMG20BQ9P0W2 317 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 STX6O43752 255 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 CIAO1O76071 339 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 TRIM28Q13263 835 aaKnown RBP23.59■■□□□ 1.37
UTP4-201ENST00000314423 CCDC129Q6ZRS4 1044 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 PUS3Q9BZE2 481 aaKnown RBP23.59■■□□□ 1.37
UTP4-201ENST00000314423 TPCN1Q9ULQ1 816 aa23.59■■□□□ 1.37
UTP4-201ENST00000314423 MBD3O95983 291 aa23.58■■□□□ 1.37
UTP4-201ENST00000314423 USPL1Q5W0Q7 1092 aa23.58■■□□□ 1.37
UTP4-201ENST00000314423 BLOC1S2Q6QNY1 142 aa23.58■■□□□ 1.37
UTP4-201ENST00000314423 KBTBD3Q8NAB2 608 aa23.58■■□□□ 1.37
UTP4-201ENST00000314423 ZSCAN22P10073 491 aaPredicted RBP23.58■■□□□ 1.36
UTP4-201ENST00000314423 ST3GAL1Q11201 340 aa23.58■■□□□ 1.36
UTP4-201ENST00000314423 TMEM63CQ9P1W3 806 aa23.58■■□□□ 1.36
UTP4-201ENST00000314423 CCDC57Q2TAC2 916 aa23.57■■□□□ 1.36
UTP4-201ENST00000314423 TSGA10IPQ3SY00 556 aa23.57■■□□□ 1.36
UTP4-201ENST00000314423 MCMDC2Q4G0Z9 681 aa23.57■■□□□ 1.36
UTP4-201ENST00000314423 FAM89AQ96GI7 184 aa23.57■■□□□ 1.36
UTP4-201ENST00000314423 TCEANC2Q96MN5 208 aa23.57■■□□□ 1.36
UTP4-201ENST00000314423 GDPD2Q9HCC8 539 aa23.57■■□□□ 1.36
UTP4-201ENST00000314423 GOLIM4O00461 696 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 DTNBO60941 627 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 GJB2P29033 226 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 PAG1Q9NWQ8 432 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 BCL9O00512 1426 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 A0A1B0GUL7 405 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 RPS6KB1P23443 525 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 NECAB1Q8N987 351 aa23.56■■□□□ 1.36
UTP4-201ENST00000314423 PCCAP05165 728 aaPredicted RBP23.55■■□□□ 1.36
UTP4-201ENST00000314423 MAP3K15Q6ZN16 1313 aa23.55■■□□□ 1.36
UTP4-201ENST00000314423 COL14A1Q05707 1796 aaKnown RBP23.55■■□□□ 1.36
UTP4-201ENST00000314423 CCDC85AQ96PX6 553 aaPredicted RBP23.55■■□□□ 1.36
UTP4-201ENST00000314423 SLC4A9Q96Q91 983 aa23.55■■□□□ 1.36
UTP4-201ENST00000314423 PALLDQ8WX93 1383 aa23.54■■□□□ 1.36
UTP4-201ENST00000314423 NASPP49321 788 aaPredicted RBP23.54■■□□□ 1.36
UTP4-201ENST00000314423 EXOC5O00471 708 aa23.54■■□□□ 1.36
UTP4-201ENST00000314423 GIGYF2Q6Y7W6 1299 aaKnown RBP23.54■■□□□ 1.36
UTP4-201ENST00000314423 ZBTB38Q8NAP3 1195 aaPredicted RBP23.54■■□□□ 1.36
UTP4-201ENST00000314423 SYTL4Q96C24 671 aaPredicted RBP23.54■■□□□ 1.36
UTP4-201ENST00000314423 CEP126Q9P2H0 1117 aa23.54■■□□□ 1.36
UTP4-201ENST00000314423 SH3TC1Q8TE82 1336 aa23.54■■□□□ 1.36
UTP4-201ENST00000314423 ANKRD1Q15327 319 aa23.53■■□□□ 1.36
UTP4-201ENST00000314423 HLFQ16534 295 aa23.53■■□□□ 1.36
UTP4-201ENST00000314423 USP48Q86UV5 1035 aa23.53■■□□□ 1.36
UTP4-201ENST00000314423 U3KPZ7 1027 aaPredicted RBP23.53■■□□□ 1.36
UTP4-201ENST00000314423 F13A1P00488 732 aa23.53■■□□□ 1.36
UTP4-201ENST00000314423 KRT32Q14532 448 aa23.53■■□□□ 1.36
UTP4-201ENST00000314423 ALDH8A1Q9H2A2 487 aaPredicted RBP23.53■■□□□ 1.36
UTP4-201ENST00000314423 IFIT1P09914 478 aaKnown RBP23.52■■□□□ 1.36
UTP4-201ENST00000314423 CYP19A1P11511 503 aaPredicted RBP23.52■■□□□ 1.36
UTP4-201ENST00000314423 PRIM1P49642 420 aaKnown RBP23.52■■□□□ 1.36
UTP4-201ENST00000314423 TOB2Q14106 344 aaPredicted RBP23.52■■□□□ 1.36
UTP4-201ENST00000314423 SLFNL1Q499Z3 407 aa23.52■■□□□ 1.36
UTP4-201ENST00000314423 PLA2G12BQ9BX93 195 aa23.52■■□□□ 1.36
UTP4-201ENST00000314423 GADD45BO75293 160 aaPredicted RBP23.51■■□□□ 1.35
UTP4-201ENST00000314423 GPTP24298 496 aa23.51■■□□□ 1.35
UTP4-201ENST00000314423 ITGB4P16144 1822 aa23.51■■□□□ 1.35
UTP4-201ENST00000314423 SYNE4Q8N205 404 aa23.51■■□□□ 1.35
UTP4-201ENST00000314423 MTMR6Q9Y217 621 aa23.51■■□□□ 1.35
UTP4-201ENST00000314423 CNPY2Q9Y2B0 182 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms