RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TUBGCP6Q96RT7 1819 aa13.79□□□□□ -0.2
PTPN2-201ENST00000309660 RFX5P48382 616 aaPredicted RBP13.79□□□□□ -0.2
PTPN2-201ENST00000309660 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
PTPN2-201ENST00000309660 PPFIA3O75145 1194 aa13.79□□□□□ -0.2
PTPN2-201ENST00000309660 F13A1P00488 732 aa13.79□□□□□ -0.2
PTPN2-201ENST00000309660 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
PTPN2-201ENST00000309660 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
PTPN2-201ENST00000309660 ZNF335Q9H4Z2 1342 aaPredicted RBP13.79□□□□□ -0.2
PTPN2-201ENST00000309660 FOSBP53539 338 aa13.78□□□□□ -0.2
PTPN2-201ENST00000309660 LRRC24Q50LG9 513 aa13.78□□□□□ -0.2
PTPN2-201ENST00000309660 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
PTPN2-201ENST00000309660 ZSCAN31Q96LW9 406 aaPredicted RBP13.78□□□□□ -0.2
PTPN2-201ENST00000309660 SNRKQ9NRH2 765 aa13.78□□□□□ -0.2
PTPN2-201ENST00000309660 ATP5JP18859 108 aa13.77□□□□□ -0.2
PTPN2-201ENST00000309660 TAF7LQ5H9L4 462 aa13.77□□□□□ -0.2
PTPN2-201ENST00000309660 TMOD3Q9NYL9 352 aa13.77□□□□□ -0.2
PTPN2-201ENST00000309660 C5P01031 1676 aa13.77□□□□□ -0.2
PTPN2-201ENST00000309660 MSNP26038 577 aaKnown RBP13.77□□□□□ -0.21
PTPN2-201ENST00000309660 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPN2-201ENST00000309660 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 SH2B1Q9NRF2 756 aaPredicted RBP13.77□□□□□ -0.21
PTPN2-201ENST00000309660 ATP6V1DQ9Y5K8 247 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 TAF5LO75529 589 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 GPTP24298 496 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 CLCN1P35523 988 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 PUS3Q9BZE2 481 aaKnown RBP13.77□□□□□ -0.21
PTPN2-201ENST00000309660 TM6SF1Q9BZW5 370 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 TSPY26PQ9H489 355 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
PTPN2-201ENST00000309660 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
PTPN2-201ENST00000309660 PTMAP06454 111 aaKnown RBP13.76□□□□□ -0.21
PTPN2-201ENST00000309660 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
PTPN2-201ENST00000309660 RABL6Q3YEC7 729 aaPredicted RBP13.76□□□□□ -0.21
PTPN2-201ENST00000309660 DDX11Q96FC9 970 aa13.76□□□□□ -0.21
PTPN2-201ENST00000309660 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
PTPN2-201ENST00000309660 FOXO4P98177 505 aa13.76□□□□□ -0.21
PTPN2-201ENST00000309660 ASAP1Q9ULH1 1129 aa13.76□□□□□ -0.21
PTPN2-201ENST00000309660 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
PTPN2-201ENST00000309660 RPS6KB1P23443 525 aa13.75□□□□□ -0.21
PTPN2-201ENST00000309660 DNAJC10Q8IXB1 793 aa13.75□□□□□ -0.21
PTPN2-201ENST00000309660 CCDC57Q2TAC2 916 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 TFIP11Q9UBB9 837 aaKnown RBP13.74□□□□□ -0.21
PTPN2-201ENST00000309660 ERVV-2B6SEH9 535 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 H7C1W4 665 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 PHF14O94880 888 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 IFIT1P09914 478 aaKnown RBP13.74□□□□□ -0.21
PTPN2-201ENST00000309660 CASP7P55210 303 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 MCMDC2Q4G0Z9 681 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 HSP90AB3PQ58FF7 597 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 PPP1R9BQ96SB3 815 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 PAG1Q9NWQ8 432 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
PTPN2-201ENST00000309660 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 CHST3Q7LGC8 479 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 SYNE4Q8N205 404 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 BRF1Q92994 677 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 HAUS7Q99871 368 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 CEP126Q9P2H0 1117 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 DCCP43146 1447 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 CPDO75976 1380 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 MED23Q9ULK4 1368 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 CAMTA1Q9Y6Y1 1673 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 JAK2O60674 1132 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 GIMAP6Q6P9H5 292 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 Q6ZUG5 572 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 ATG9AQ7Z3C6 839 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
PTPN2-201ENST00000309660 CYP21A2P08686 494 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
PTPN2-201ENST00000309660 ANKRD1Q15327 319 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 WASHC4Q2M389 1173 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 KBTBD3Q8NAB2 608 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 TCHHQ07283 1943 aa13.73□□□□□ -0.21
PTPN2-201ENST00000309660 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 EYA2O00167 538 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
PTPN2-201ENST00000309660 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
PTPN2-201ENST00000309660 UBE2HP62256 183 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 COL15A1P39059 1388 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 STRCP1A6NGW2 1772 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 ZNF609O15014 1411 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
PTPN2-201ENST00000309660 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 KIF6Q6ZMV9 814 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
PTPN2-201ENST00000309660 CEBPZQ03701 1054 aaKnown RBP13.72□□□□□ -0.21
PTPN2-201ENST00000309660 A0A0G2JLW4 131 aa13.71□□□□□ -0.21
PTPN2-201ENST00000309660 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
PTPN2-201ENST00000309660 KCNB2Q92953 911 aa13.71□□□□□ -0.21
PTPN2-201ENST00000309660 H3BQV1 296 aa13.71□□□□□ -0.22
PTPN2-201ENST00000309660 CAMK4Q16566 473 aa13.71□□□□□ -0.22
PTPN2-201ENST00000309660 IFFO2Q5TF58 517 aa13.71□□□□□ -0.22
PTPN2-201ENST00000309660 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.22
PTPN2-201ENST00000309660 HAND2P61296 217 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms