RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
CCDC8-201ENST00000307522 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
CCDC8-201ENST00000307522 ZCCHC17Q9NP64 241 aaKnown RBP19.16■□□□□ 0.66
CCDC8-201ENST00000307522 CALCOCO1Q9P1Z2 691 aa19.16■□□□□ 0.66
CCDC8-201ENST00000307522 CLIP2Q9UDT6 1046 aa19.16■□□□□ 0.66
CCDC8-201ENST00000307522 ZNF397Q8NF99 534 aaPredicted RBP19.16■□□□□ 0.66
CCDC8-201ENST00000307522 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
CCDC8-201ENST00000307522 FEZ2Q9UHY8 353 aaPredicted RBP19.16■□□□□ 0.66
CCDC8-201ENST00000307522 TYRO3Q06418 890 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 C10orf67Q8IYJ2 551 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 NECAB1Q8N987 351 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 DNAJC25Q9H1X3 360 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 MRVI1Q9Y6F6 885 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 NPHP3Q7Z494 1330 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 F13A1P00488 732 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
CCDC8-201ENST00000307522 RIC3Q7Z5B4 369 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 SMC3Q9UQE7 1217 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 HMMRO75330 724 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 RSPH14Q9UHP6 348 aa19.15■□□□□ 0.66
CCDC8-201ENST00000307522 AK2P54819 239 aa19.14■□□□□ 0.65
CCDC8-201ENST00000307522 COPS6Q7L5N1 327 aa19.14■□□□□ 0.65
CCDC8-201ENST00000307522 SOS1Q07889 1333 aaPredicted RBP19.14■□□□□ 0.65
CCDC8-201ENST00000307522 LTN1O94822 1766 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 HTATSF1O43719 755 aaKnown RBP19.13■□□□□ 0.65
CCDC8-201ENST00000307522 ADAMTS2O95450 1211 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 CABP4P57796 275 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 AMOTQ4VCS5 1084 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 ZNF790Q6PG37 636 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 FAM200AQ8TCP9 573 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 XAGE3Q8WTP9 111 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 EPC1Q9H2F5 836 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.13■□□□□ 0.65
CCDC8-201ENST00000307522 TTC5Q8N0Z6 440 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 DACT1Q9NYF0 836 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 NDUFB9Q9Y6M9 179 aa19.13■□□□□ 0.65
CCDC8-201ENST00000307522 ERCC4Q92889 916 aaPredicted RBP19.12■□□□□ 0.65
CCDC8-201ENST00000307522 LRRCC1Q9C099 1032 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 LCMT1Q9UIC8 334 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 CHMLP26374 656 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 GJB2P29033 226 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 RASEFQ8IZ41 740 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 INTS4Q96HW7 963 aaKnown RBP19.12■□□□□ 0.65
CCDC8-201ENST00000307522 SPG7Q9UQ90 795 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 GNAI3P08754 354 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 PHKG2P15735 406 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 ST5P78524 1137 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 PTPN14Q15678 1187 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 TCEANC2Q96MN5 208 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 MYD88Q99836 296 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 TOMM22Q9NS69 142 aa19.12■□□□□ 0.65
CCDC8-201ENST00000307522 NFAT5O94916 1531 aa19.11■□□□□ 0.65
CCDC8-201ENST00000307522 RGPD1P0DJD0 1748 aa19.11■□□□□ 0.65
CCDC8-201ENST00000307522 MST1RQ04912 1400 aa19.11■□□□□ 0.65
CCDC8-201ENST00000307522 NUTM2BA6NNL0 878 aaPredicted RBP19.11■□□□□ 0.65
CCDC8-201ENST00000307522 NUTM2EB1AL46 878 aaPredicted RBP19.11■□□□□ 0.65
CCDC8-201ENST00000307522 MCM2P49736 904 aa19.11■□□□□ 0.65
CCDC8-201ENST00000307522 ZNF75DP51815 510 aa19.11■□□□□ 0.65
CCDC8-201ENST00000307522 NUTM2AQ8IVF1 878 aaPredicted RBP19.11■□□□□ 0.65
CCDC8-201ENST00000307522 NUP62CLQ9H1M0 184 aa19.11■□□□□ 0.65
CCDC8-201ENST00000307522 PIP4K2BP78356 416 aa19.1■□□□□ 0.65
CCDC8-201ENST00000307522 MAP3K11Q16584 847 aa19.1■□□□□ 0.65
CCDC8-201ENST00000307522 TULP2O00295 520 aa19.1■□□□□ 0.65
CCDC8-201ENST00000307522 SEC31AO94979 1220 aaKnown RBP19.1■□□□□ 0.65
CCDC8-201ENST00000307522 CEBPZQ03701 1054 aaKnown RBP19.1■□□□□ 0.65
CCDC8-201ENST00000307522 RUFY3Q7L099 469 aa19.1■□□□□ 0.65
CCDC8-201ENST00000307522 TTC6Q86TZ1 520 aa19.1■□□□□ 0.65
CCDC8-201ENST00000307522 TNMDQ9H2S6 317 aa19.1■□□□□ 0.65
CCDC8-201ENST00000307522 DBF4Q9UBU7 674 aaPredicted RBP19.1■□□□□ 0.65
CCDC8-201ENST00000307522 BEND3Q5T5X7 828 aa19.1■□□□□ 0.65
CCDC8-201ENST00000307522 A1BGP04217 495 aa19.09■□□□□ 0.65
CCDC8-201ENST00000307522 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
CCDC8-201ENST00000307522 SYT10Q6XYQ8 523 aa19.09■□□□□ 0.65
CCDC8-201ENST00000307522 PAXBP1Q9Y5B6 917 aa19.09■□□□□ 0.65
CCDC8-201ENST00000307522 SKILP12757 684 aa19.09■□□□□ 0.65
CCDC8-201ENST00000307522 FOSBP53539 338 aa19.09■□□□□ 0.65
CCDC8-201ENST00000307522 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.09■□□□□ 0.65
CCDC8-201ENST00000307522 CEMIPQ8WUJ3 1361 aa19.09■□□□□ 0.65
CCDC8-201ENST00000307522 COL9A3Q14050 684 aaPredicted RBP19.08■□□□□ 0.65
CCDC8-201ENST00000307522 KRBA2Q6ZNG9 492 aa19.08■□□□□ 0.65
CCDC8-201ENST00000307522 ZBTB3Q9H5J0 574 aa19.08■□□□□ 0.65
CCDC8-201ENST00000307522 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.65
CCDC8-201ENST00000307522 TPM3P06753 285 aa19.08■□□□□ 0.64
CCDC8-201ENST00000307522 CCDC8Q9H0W5 538 aaPredicted RBP19.08■□□□□ 0.64
CCDC8-201ENST00000307522 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
CCDC8-201ENST00000307522 MARF1Q9Y4F3 1742 aaKnown RBP19.08■□□□□ 0.64
CCDC8-201ENST00000307522 GOLGA6L4A6NEF3 574 aa19.08■□□□□ 0.64
CCDC8-201ENST00000307522 IFNL2Q8IZJ0 200 aa19.08■□□□□ 0.64
CCDC8-201ENST00000307522 MEGF6O75095 1541 aa19.08■□□□□ 0.64
CCDC8-201ENST00000307522 CASTP20810 708 aaKnown RBP19.07■□□□□ 0.64
CCDC8-201ENST00000307522 ZNF165P49910 485 aa19.07■□□□□ 0.64
CCDC8-201ENST00000307522 CCDC34Q96HJ3 373 aa19.07■□□□□ 0.64
CCDC8-201ENST00000307522 RAD50Q92878 1312 aa19.07■□□□□ 0.64
CCDC8-201ENST00000307522 CYP2C19P33261 490 aa19.07■□□□□ 0.64
CCDC8-201ENST00000307522 ADCY9O60503 1353 aa19.07■□□□□ 0.64
CCDC8-201ENST00000307522 ANKRD65E5RJM6 399 aa19.06■□□□□ 0.64
CCDC8-201ENST00000307522 PPFIA3O75145 1194 aa19.06■□□□□ 0.64
CCDC8-201ENST00000307522 CLCN6P51797 869 aa19.06■□□□□ 0.64
CCDC8-201ENST00000307522 SECISBP2LQ93073 1101 aaKnown RBP19.06■□□□□ 0.64
CCDC8-201ENST00000307522 SUCLG2Q96I99 432 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms