RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 NUP58Q9BVL2 599 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 MYO1AQ9UBC5 1043 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 NEXMIFQ5QGS0 1516 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 PTPN14Q15678 1187 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 ARFGAP3Q9NP61 516 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 TMEM51Q9NW97 253 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 VWA3BQ502W6 1294 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 MLH3Q9UHC1 1453 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 DKC1O60832 514 aaKnown RBP eCLIP4.61□□□□□ -1.67
USH2A-201ENST00000307340 ALDH3A1P30838 453 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 SMC1AQ14683 1233 aaKnown RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 TBC1D32Q96NH3 1257 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 RBM28Q9NW13 759 aaKnown RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 AATKQ6ZMQ8 1374 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 KIRREL3Q8IZU9 778 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 MCTP1Q6DN14 999 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 MIS12Q9H081 205 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 FLT4P35916 1363 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 CHD1O14646 1710 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 ATP2A2P16615 1042 aaKnown RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 UBAC1Q9BSL1 405 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 YEATS4O95619 227 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 NEK4P51957 841 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 CHMP3Q9Y3E7 222 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 ERBB4Q15303 1308 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 APAF1O14727 1248 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 RABGAP1Q9Y3P9 1069 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 HIRIP3Q9BW71 556 aaPredicted RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 ZHX1Q9UKY1 873 aaPredicted RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 ALDH1L1O75891 902 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 GNA14O95837 355 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 KRT18P05783 430 aaKnown RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 CNGA4Q8IV77 575 aa4.61□□□□□ -1.67
USH2A-201ENST00000307340 ORC3Q9UBD5 711 aaPredicted RBP4.61□□□□□ -1.67
USH2A-201ENST00000307340 ANKRD62A6NC57 917 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 CCAR2Q8N163 923 aaKnown RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 PARP2Q9UGN5 583 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 USP19O94966 1318 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 OPA1O60313 960 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 RIPPLY1Q0D2K3 151 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 KIF4BQ2VIQ3 1234 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 BAG4O95429 457 aaKnown RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 PLCB1Q9NQ66 1216 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 RNF123Q5XPI4 1314 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 LOXHD1Q8IVV2 1947 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 NLRP1Q9C000 1473 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 EIF3CLB5ME19 914 aaKnown RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 ME1P48163 572 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 PPP2R3AQ06190 1150 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 PIBF1Q8WXW3 757 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 EIF3CQ99613 913 aaKnown RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 MKRN1Q9UHC7 482 aaKnown RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 GBP6Q6ZN66 633 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 ERMNQ8TAM6 284 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 IWS1Q96ST2 819 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 GZF1Q9H116 711 aaPredicted RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 ARHGAP25P42331 645 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 MX1P20591 662 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 SOGA3Q5TF21 947 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 TEKT1Q969V4 418 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 RNF14Q9UBS8 474 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 ORC2Q13416 577 aaPredicted RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 DONSONQ9NYP3 566 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 RPAP1Q9BWH6 1393 aaPredicted RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 LAD1O00515 517 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 ERCC6LQ2NKX8 1250 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 HDGFL1Q5TGJ6 251 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 RCAN1P53805 252 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 CCDC82Q8N4S0 544 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 A0A1B0GVL5 298 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 GNA11P29992 359 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 MICAL3Q7RTP6 2002 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 MMP14P50281 582 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 POTEDQ86YR6 584 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 GBP7Q8N8V2 638 aaPredicted RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 CEP126Q9P2H0 1117 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 CDC42BPGQ6DT37 1551 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 UQCRFS1P1P0C7P4 283 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 VPS53Q5VIR6 699 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 APBA1Q02410 837 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 MAPK8IP2Q13387 824 aaPredicted RBP4.6□□□□□ -1.67
USH2A-201ENST00000307340 ABTB2Q8N961 1025 aa4.6□□□□□ -1.67
USH2A-201ENST00000307340 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.59□□□□□ -1.67
USH2A-201ENST00000307340 RPL13P26373 211 aaKnown RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 SMC5Q8IY18 1101 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 ATP10DQ9P241 1426 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 MROH2AA6NES4 1674 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 MROH1Q8NDA8 1641 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 AXDND1Q5T1B0 1012 aaPredicted RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 MTA3Q9BTC8 594 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 CCDC9Q9Y3X0 531 aaKnown RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 EFCAB6Q5THR3 1501 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 CLTCL1P53675 1640 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 DCAF8L1A6NGE4 600 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 IFIT1P09914 478 aaKnown RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 IGHMBP2P38935 993 aaKnown RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 NBPF11Q86T75 865 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 ADAMTS8Q9UP79 889 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 ABCC12Q96J65 1359 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 MCM4P33991 863 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms