RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
SSX3-201ENST00000298396 SLC27A3Q5K4L6 730 aa7.68□□□□□ -1.18
SSX3-201ENST00000298396 DUSP27Q5VZP5 1158 aa7.68□□□□□ -1.18
SSX3-201ENST00000298396 SMIM5Q71RC9 77 aa7.68□□□□□ -1.18
SSX3-201ENST00000298396 LAPTM4BQ86VI4 370 aa7.68□□□□□ -1.18
SSX3-201ENST00000298396 C8orf58Q8NAV2 365 aa7.68□□□□□ -1.18
SSX3-201ENST00000298396 FMNL2Q96PY5 1086 aa7.68□□□□□ -1.18
SSX3-201ENST00000298396 USP16Q9Y5T5 823 aa7.68□□□□□ -1.18
SSX3-201ENST00000298396 CYP19A1P11511 503 aaPredicted RBP7.67□□□□□ -1.18
SSX3-201ENST00000298396 FAM161AQ3B820 660 aa7.67□□□□□ -1.18
SSX3-201ENST00000298396 INTS5Q6P9B9 1019 aaKnown RBP7.67□□□□□ -1.18
SSX3-201ENST00000298396 NUDT18Q6ZVK8 323 aa7.67□□□□□ -1.18
SSX3-201ENST00000298396 PARP9Q8IXQ6 854 aa7.67□□□□□ -1.18
SSX3-201ENST00000298396 TTC5Q8N0Z6 440 aa7.67□□□□□ -1.18
SSX3-201ENST00000298396 SNRPA1P09661 255 aaKnown RBP7.66□□□□□ -1.18
SSX3-201ENST00000298396 CRKLP46109 303 aaKnown RBP7.66□□□□□ -1.18
SSX3-201ENST00000298396 PIP4K2AP48426 406 aaPredicted RBP7.66□□□□□ -1.18
SSX3-201ENST00000298396 CALD1Q05682 793 aaKnown RBP7.66□□□□□ -1.18
SSX3-201ENST00000298396 EXOSC9Q06265 439 aaKnown RBP7.66□□□□□ -1.18
SSX3-201ENST00000298396 PROSER3Q2NL68 480 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 NBPF14Q5TI25 921 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 NBPF10Q6P3W6 841 aaKnown RBP7.66□□□□□ -1.18
SSX3-201ENST00000298396 LRP10Q7Z4F1 713 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 NBPF15Q8N660 670 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 PDGFDQ9GZP0 370 aaPredicted RBP7.66□□□□□ -1.18
SSX3-201ENST00000298396 TMEM134Q9H6X4 195 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 PNMA3Q9UL41 463 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 ZBTB1Q9Y2K1 713 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 CNTNAP4Q9C0A0 1308 aa7.66□□□□□ -1.18
SSX3-201ENST00000298396 RCCD1A6NED2 376 aa7.65□□□□□ -1.18
SSX3-201ENST00000298396 E9PSI1 815 aa7.65□□□□□ -1.18
SSX3-201ENST00000298396 ELL2O00472 640 aaPredicted RBP7.65□□□□□ -1.18
SSX3-201ENST00000298396 A1BGP04217 495 aa7.65□□□□□ -1.18
SSX3-201ENST00000298396 DNAJB2P25686 324 aa7.65□□□□□ -1.18
SSX3-201ENST00000298396 SOS1Q07889 1333 aaPredicted RBP7.65□□□□□ -1.18
SSX3-201ENST00000298396 PNPLA7Q6ZV29 1317 aa7.65□□□□□ -1.18
SSX3-201ENST00000298396 YTHDC1Q96MU7 727 aaKnown RBP7.65□□□□□ -1.18
SSX3-201ENST00000298396 REPIN1Q9BWE0 567 aaKnown RBP7.65□□□□□ -1.18
SSX3-201ENST00000298396 ANKRD31Q8N7Z5 1873 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 LAMB2P55268 1798 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 NRXN2Q9P2S2 1712 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 VAMP4O75379 141 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 ANXA1P04083 346 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 HOXB7P09629 217 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 CLCN1P35523 988 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 SLC15A2Q16348 729 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 RC3H1Q5TC82 1133 aaKnown RBP7.64□□□□□ -1.19
SSX3-201ENST00000298396 NECTIN2Q92692 538 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 NBPF3Q9H094 633 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 CCDC87Q9NVE4 849 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 KIF13BQ9NQT8 1826 aa7.64□□□□□ -1.19
SSX3-201ENST00000298396 COL15A1P39059 1388 aa7.63□□□□□ -1.19
SSX3-201ENST00000298396 SMAPO00193 183 aa7.63□□□□□ -1.19
SSX3-201ENST00000298396 EIF5P55010 431 aaKnown RBP7.63□□□□□ -1.19
SSX3-201ENST00000298396 TWISTNBQ3B726 338 aaPredicted RBP7.63□□□□□ -1.19
SSX3-201ENST00000298396 MYH16Q9H6N6 1097 aa7.63□□□□□ -1.19
SSX3-201ENST00000298396 GPCPD1Q9NPB8 672 aa7.63□□□□□ -1.19
SSX3-201ENST00000298396 CHPF2Q9P2E5 772 aa7.63□□□□□ -1.19
SSX3-201ENST00000298396 KIAA1551Q9HCM1 1747 aa7.63□□□□□ -1.19
SSX3-201ENST00000298396 MYH3P11055 1940 aa7.62□□□□□ -1.19
SSX3-201ENST00000298396 DDX60Q8IY21 1712 aaKnown RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 TCERG1O14776 1098 aaKnown RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 RPS6KA4O75676 772 aa7.62□□□□□ -1.19
SSX3-201ENST00000298396 EIF2S2P20042 333 aaKnown RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 CANXP27824 592 aaKnown RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 R3HDM1Q15032 1099 aaKnown RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
SSX3-201ENST00000298396 COL23A1Q86Y22 540 aaPredicted RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 TEX13AQ9BXU3 409 aaPredicted RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 KDM4CQ9H3R0 1056 aa7.62□□□□□ -1.19
SSX3-201ENST00000298396 DAXXQ9UER7 740 aaPredicted RBP7.62□□□□□ -1.19
SSX3-201ENST00000298396 ERBB4Q15303 1308 aa7.61□□□□□ -1.19
SSX3-201ENST00000298396 LRP5O75197 1615 aa7.61□□□□□ -1.19
SSX3-201ENST00000298396 STARD3NLO95772 234 aa7.61□□□□□ -1.19
SSX3-201ENST00000298396 G2E3Q7L622 706 aa7.61□□□□□ -1.19
SSX3-201ENST00000298396 GPBP1L1Q9HC44 474 aaPredicted RBP7.61□□□□□ -1.19
SSX3-201ENST00000298396 FAM217BQ9NTX9 383 aaPredicted RBP7.61□□□□□ -1.19
SSX3-201ENST00000298396 STK32BQ9NY57 414 aa7.61□□□□□ -1.19
SSX3-201ENST00000298396 SRP68Q9UHB9 627 aaKnown RBP7.61□□□□□ -1.19
SSX3-201ENST00000298396 SEPT9Q9UHD8 586 aaPredicted RBP7.61□□□□□ -1.19
SSX3-201ENST00000298396 TAF1P21675 1872 aa7.61□□□□□ -1.19
SSX3-201ENST00000298396 BRCA1P38398 1863 aaKnown RBP7.61□□□□□ -1.19
SSX3-201ENST00000298396 CACNA1SQ13698 1873 aa7.61□□□□□ -1.19
SSX3-201ENST00000298396 COL11A2P13942 1736 aaPredicted RBP7.61□□□□□ -1.19
SSX3-201ENST00000298396 TNRC6CQ9HCJ0 1690 aaKnown RBP7.6□□□□□ -1.19
SSX3-201ENST00000298396 CAMTA2O94983 1202 aa7.6□□□□□ -1.19
SSX3-201ENST00000298396 MYL6BP14649 208 aa7.6□□□□□ -1.19
SSX3-201ENST00000298396 SSFA2P28290 1259 aa7.6□□□□□ -1.19
SSX3-201ENST00000298396 IL6STP40189 918 aaPredicted RBP7.6□□□□□ -1.19
SSX3-201ENST00000298396 MDM2Q00987 491 aaPredicted RBP7.6□□□□□ -1.19
SSX3-201ENST00000298396 GIGYF2Q6Y7W6 1299 aaKnown RBP7.6□□□□□ -1.19
SSX3-201ENST00000298396 TTLL7Q6ZT98 887 aa7.6□□□□□ -1.19
SSX3-201ENST00000298396 SSH1Q8WYL5 1049 aa7.6□□□□□ -1.19
SSX3-201ENST00000298396 PHAXQ9H814 394 aaKnown RBP7.6□□□□□ -1.19
SSX3-201ENST00000298396 DDX21Q9NR30 783 aaKnown RBP eCLIP7.6□□□□□ -1.19
SSX3-201ENST00000298396 TFCP2L1Q9NZI6 479 aa7.6□□□□□ -1.19
SSX3-201ENST00000298396 ADCY9O60503 1353 aa7.59□□□□□ -1.19
SSX3-201ENST00000298396 DLEC1Q9Y238 1755 aa7.59□□□□□ -1.19
SSX3-201ENST00000298396 USP42Q9H9J4 1324 aaKnown RBP7.59□□□□□ -1.19
SSX3-201ENST00000298396 RARSP54136 660 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms