RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 ZSCAN23Q3MJ62 389 aa17.08■□□□□ 0.32
PTK7-201ENST00000230418 MINDY4BA8MYZ0 360 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
PTK7-201ENST00000230418 CKAP2LQ8IYA6 745 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 RASSF8Q8NHQ8 419 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 USP48Q86UV5 1035 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
PTK7-201ENST00000230418 MCMDC2Q4G0Z9 681 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
PTK7-201ENST00000230418 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
PTK7-201ENST00000230418 Q6ZUG5 572 aa17.06■□□□□ 0.32
PTK7-201ENST00000230418 TEX13AQ9BXU3 409 aaPredicted RBP17.06■□□□□ 0.32
PTK7-201ENST00000230418 RAD50Q92878 1312 aa17.06■□□□□ 0.32
PTK7-201ENST00000230418 KCNQ4P56696 695 aa17.06■□□□□ 0.32
PTK7-201ENST00000230418 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
PTK7-201ENST00000230418 NIP7Q9Y221 180 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTK7-201ENST00000230418 SASH1O94885 1247 aa17.05■□□□□ 0.32
PTK7-201ENST00000230418 SYT1P21579 422 aa17.05■□□□□ 0.32
PTK7-201ENST00000230418 STK38Q15208 465 aa17.05■□□□□ 0.32
PTK7-201ENST00000230418 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
PTK7-201ENST00000230418 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
PTK7-201ENST00000230418 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
PTK7-201ENST00000230418 CTNNA3Q9UI47 895 aa17.05■□□□□ 0.32
PTK7-201ENST00000230418 GOLGA6L6A8MZA4 724 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 ESPNB1AK53 854 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 ZNF213O14771 459 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 HSPA4P34932 840 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 SLFNL1Q499Z3 407 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 EYA2O00167 538 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 OSBPL3Q9H4L5 887 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 GIMAP6Q6P9H5 292 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 KIF2CQ99661 725 aa17.04■□□□□ 0.32
PTK7-201ENST00000230418 DBNLQ9UJU6 430 aaKnown RBP17.04■□□□□ 0.32
PTK7-201ENST00000230418 SLC27A2O14975 620 aa17.03■□□□□ 0.32
PTK7-201ENST00000230418 STAP2Q9UGK3 403 aa17.03■□□□□ 0.32
PTK7-201ENST00000230418 JAG2Q9Y219 1238 aa17.03■□□□□ 0.32
PTK7-201ENST00000230418 SPATA31A3Q5VYP0 1347 aa17.03■□□□□ 0.32
PTK7-201ENST00000230418 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
PTK7-201ENST00000230418 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
PTK7-201ENST00000230418 NAPBQ9H115 298 aa17.03■□□□□ 0.32
PTK7-201ENST00000230418 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
PTK7-201ENST00000230418 TAF5LO75529 589 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 RUFY3Q7L099 469 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 LMTK3Q96Q04 1460 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.32
PTK7-201ENST00000230418 ITGA6P23229 1130 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 MICU3Q86XE3 530 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 PI4K2BQ8TCG2 481 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 TRIM5Q9C035 493 aa17.02■□□□□ 0.32
PTK7-201ENST00000230418 DHX16O60231 1041 aaKnown RBP17.02■□□□□ 0.31
PTK7-201ENST00000230418 RXRAP19793 462 aa17.02■□□□□ 0.31
PTK7-201ENST00000230418 SYNE4Q8N205 404 aa17.02■□□□□ 0.31
PTK7-201ENST00000230418 USP25Q9UHP3 1055 aa17.02■□□□□ 0.31
PTK7-201ENST00000230418 ADCY9O60503 1353 aa17.02■□□□□ 0.31
PTK7-201ENST00000230418 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
PTK7-201ENST00000230418 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
PTK7-201ENST00000230418 CCDC191Q8NCU4 936 aa17.01■□□□□ 0.31
PTK7-201ENST00000230418 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
PTK7-201ENST00000230418 POLA2Q14181 598 aa17.01■□□□□ 0.31
PTK7-201ENST00000230418 ZSCAN25Q6NSZ9 544 aa17.01■□□□□ 0.31
PTK7-201ENST00000230418 NUP62CLQ9H1M0 184 aa17.01■□□□□ 0.31
PTK7-201ENST00000230418 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
PTK7-201ENST00000230418 ATP10DQ9P241 1426 aa17.01■□□□□ 0.31
PTK7-201ENST00000230418 NRDCO43847 1150 aa17■□□□□ 0.31
PTK7-201ENST00000230418 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
PTK7-201ENST00000230418 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
PTK7-201ENST00000230418 FAM98CQ17RN3 349 aaKnown RBP17■□□□□ 0.31
PTK7-201ENST00000230418 NACAP1Q9BZK3 213 aa17■□□□□ 0.31
PTK7-201ENST00000230418 GNL3LQ9NVN8 582 aaKnown RBP17■□□□□ 0.31
PTK7-201ENST00000230418 ZPR1O75312 459 aa17■□□□□ 0.31
PTK7-201ENST00000230418 SLC5A1P13866 664 aa17■□□□□ 0.31
PTK7-201ENST00000230418 SART3Q15020 963 aaKnown RBP17■□□□□ 0.31
PTK7-201ENST00000230418 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
PTK7-201ENST00000230418 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
PTK7-201ENST00000230418 XAGE2Q96GT9 111 aa17■□□□□ 0.31
PTK7-201ENST00000230418 NOL10Q9BSC4 688 aaKnown RBP17■□□□□ 0.31
PTK7-201ENST00000230418 ANO8Q9HCE9 1232 aaPredicted RBP17■□□□□ 0.31
PTK7-201ENST00000230418 C1orf167Q5SNV9 1468 aa17■□□□□ 0.31
PTK7-201ENST00000230418 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 F13A1P00488 732 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 CHGBP05060 677 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 IL25Q9H293 177 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 MAP3K12Q12852 859 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 ZNF592Q92610 1267 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 ZBTB1Q9Y2K1 713 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 AOX1Q06278 1338 aa16.99■□□□□ 0.31
PTK7-201ENST00000230418 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
PTK7-201ENST00000230418 GAS2L3Q86XJ1 694 aa16.98■□□□□ 0.31
PTK7-201ENST00000230418 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms