RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 NRDCO43847 1150 aa12.17□□□□□ -0.46
CHERP-201ENST00000198939 HOXB7P09629 217 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 PIGBQ92521 554 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 TRIM5Q9C035 493 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 DDX41Q9UJV9 622 aaKnown RBP12.16□□□□□ -0.46
CHERP-201ENST00000198939 PAXBP1Q9Y5B6 917 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 HMMRO75330 724 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 RPAP2Q8IXW5 612 aaPredicted RBP12.16□□□□□ -0.46
CHERP-201ENST00000198939 MRC1P22897 1456 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 TERF2Q15554 542 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 MBIPQ9NS73 344 aa12.16□□□□□ -0.46
CHERP-201ENST00000198939 SLFN14P0C7P3 912 aa12.15□□□□□ -0.46
CHERP-201ENST00000198939 SRCIN1Q9C0H9 1055 aa12.15□□□□□ -0.46
CHERP-201ENST00000198939 KCNF1Q9H3M0 494 aa12.15□□□□□ -0.46
CHERP-201ENST00000198939 SNRPA1P09661 255 aaKnown RBP12.15□□□□□ -0.46
CHERP-201ENST00000198939 CUL4AQ13619 759 aa12.15□□□□□ -0.46
CHERP-201ENST00000198939 TEX35Q5T0J7 233 aa12.14□□□□□ -0.47
CHERP-201ENST00000198939 SMC3Q9UQE7 1217 aa12.14□□□□□ -0.47
CHERP-201ENST00000198939 NAA30Q147X3 362 aaPredicted RBP12.14□□□□□ -0.47
CHERP-201ENST00000198939 SYCP1Q15431 976 aa12.14□□□□□ -0.47
CHERP-201ENST00000198939 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
CHERP-201ENST00000198939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
CHERP-201ENST00000198939 STARD3NLO95772 234 aa12.14□□□□□ -0.47
CHERP-201ENST00000198939 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
CHERP-201ENST00000198939 ANKRD44Q8N8A2 993 aa12.14□□□□□ -0.47
CHERP-201ENST00000198939 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 IRX3P78415 501 aaPredicted RBP12.13□□□□□ -0.47
CHERP-201ENST00000198939 ZNF397Q8NF99 534 aaPredicted RBP12.13□□□□□ -0.47
CHERP-201ENST00000198939 KIF18AQ8NI77 898 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 TRIM37O94972 964 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHERP-201ENST00000198939 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 V9GYY5 206 aaPredicted RBP12.13□□□□□ -0.47
CHERP-201ENST00000198939 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 ABCC4O15439 1325 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 BAG6P46379 1132 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
CHERP-201ENST00000198939 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
CHERP-201ENST00000198939 MORC2Q9Y6X9 1032 aaPredicted RBP12.13□□□□□ -0.47
CHERP-201ENST00000198939 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
CHERP-201ENST00000198939 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 STK31Q9BXU1 1019 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 SHANK3Q9BYB0 1731 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 APBA3O96018 575 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 GOLGA6L1Q8N7Z2 621 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.12□□□□□ -0.47
CHERP-201ENST00000198939 STX6O43752 255 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 LRMPQ12912 555 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 FAM182BQ5T319 152 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 TSPYL1Q9H0U9 437 aa12.12□□□□□ -0.47
CHERP-201ENST00000198939 PLSCR1O15162 318 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 ANAPC15P60006 121 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 SLC39A6Q13433 755 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 FAM200AQ8TCP9 573 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 ESYT1Q9BSJ8 1104 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 PALD1Q9ULE6 856 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 CAMK4Q16566 473 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
CHERP-201ENST00000198939 KCNQ2O43526 872 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 PDE1AP54750 535 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 TSHZ3Q63HK5 1081 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 CCAR2Q8N163 923 aaKnown RBP12.11□□□□□ -0.47
CHERP-201ENST00000198939 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
CHERP-201ENST00000198939 ASAP1Q9ULH1 1129 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
CHERP-201ENST00000198939 MAP3K11Q16584 847 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 CERS3Q8IU89 383 aa12.11□□□□□ -0.47
CHERP-201ENST00000198939 ATP6V1AP38606 617 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 GNL2Q13823 731 aaKnown RBP12.1□□□□□ -0.47
CHERP-201ENST00000198939 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 GPS2Q13227 327 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 PTPN14Q15678 1187 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 CEP85Q6P2H3 762 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 NUP62CLQ9H1M0 184 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 SIK1P57059 783 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
CHERP-201ENST00000198939 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
CHERP-201ENST00000198939 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
CHERP-201ENST00000198939 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
CHERP-201ENST00000198939 GIGYF1O75420 1035 aaPredicted RBP12.09□□□□□ -0.47
CHERP-201ENST00000198939 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
CHERP-201ENST00000198939 TMEM87AQ8NBN3 555 aa12.09□□□□□ -0.47
CHERP-201ENST00000198939 CCNL1Q9UK58 526 aaPredicted RBP12.09□□□□□ -0.47
CHERP-201ENST00000198939 NHSQ6T4R5 1651 aa12.09□□□□□ -0.47
CHERP-201ENST00000198939 AP5Z1O43299 807 aa12.09□□□□□ -0.47
CHERP-201ENST00000198939 F13A1P00488 732 aa12.09□□□□□ -0.47
CHERP-201ENST00000198939 SYT1P21579 422 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 HDGFL1Q5TGJ6 251 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 TNMDQ9H2S6 317 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
CHERP-201ENST00000198939 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms