RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Mrps27Q8BK72 415 aaKnown RBP17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Brf1Q8CFK2 676 aa17.29■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Brpf1B2RRD7 1212 aa17.27■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Ftl2P49945 183 aa17.27■□□□□ 0.36
Ssr1-204ENSMUST00000225319 CalcaP70160 136 aa17.27■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Gsdma2Q32M21 443 aa17.27■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Chmp3Q9CQ10 224 aa17.27■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Rrs1Q9CYH6 365 aaKnown RBP17.27■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Fbxo3Q9DC63 480 aa17.27■□□□□ 0.36
Ssr1-204ENSMUST00000225319 Cyp2c23E9Q5K4 494 aa17.26■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Dctn1O08788 1281 aa17.26■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Neurod6P48986 337 aa17.26■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Zc3h12cQ5DTV4 884 aa17.26■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Slc38a10Q5I012 1090 aa17.26■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Spryd3E9Q9B3 442 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Itga6Q61739 1091 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Gimap8Q75N62 688 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 RtcbQ99LF4 505 aaKnown RBP17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Mapk8ip1Q9WVI9 707 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Col3a1P08121 1464 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Hsp90b1P08113 802 aaKnown RBP17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Gpr182P43142 395 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Vars2Q3U2A8 1060 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 BcanQ61361 883 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Tmem266Q8BZB3 538 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Dnttip2Q8R2M2 758 aaKnown RBP17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Ncoa5Q91W39 579 aaKnown RBP17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 PtmsQ9D0J8 101 aaKnown RBP17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Phf14Q9D4H9 881 aa17.25■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Kif20aP97329 887 aa17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 EspnlQ3UYR4 1005 aa17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Kiaa0319Q5SZV5 1081 aa17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Asap2Q7SIG6 958 aa17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Zkscan1Q8BGS3 561 aaKnown RBP17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Q8BT18 775 aa17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Ppil4Q9CXG3 492 aaKnown RBP17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Ubn2Q80WC1 1314 aa17.24■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Znf609Q8BZ47 1413 aa17.23■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Stox1B2RQL2 990 aa17.23■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Stk3Q9JI10 497 aa17.23■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Spata31d1bE9QA57 1361 aa17.23■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Col11a2Q64739 1736 aa17.22■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Scn11aQ9R053 1765 aa17.22■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Ppfia1B2RXQ2 1266 aa17.22■□□□□ 0.35
Ssr1-204ENSMUST00000225319 ZyxQ62523 564 aa17.22■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Ankrd13dQ6PD24 605 aa17.22■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Cyp27a1Q9DBG1 533 aa17.22■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Snrpa1P57784 255 aaKnown RBP17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Anapc15P60007 132 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Plbd2Q3TCN2 594 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Il1rapl2Q9ERS6 686 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Kcnq5Q9JK45 933 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Rad50P70388 1312 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Phrf1A6H619 1682 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Rbbp8nlA2ABX0 614 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 MccE9PWI3 1003 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 CltaO08585 235 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Timm10P62073 90 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Zbtb45Q52KG4 520 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Zkscan8Q8BSL0 588 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Bag4Q8CI61 457 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Krt25Q8VCW2 446 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Foxo3Q9WVH4 672 aa17.21■□□□□ 0.35
Ssr1-204ENSMUST00000225319 Snapc4Q8BP86 1333 aa17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Slc4a1P04919 929 aa17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Plekhf1Q3TB82 279 aa17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Srp68Q8BMA6 625 aaKnown RBP17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Amhr2Q8K592 568 aa17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Bloc1s4Q8VED2 215 aa17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Bmp2kQ91Z96 1138 aa17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Sf3b3Q921M3 1217 aaKnown RBP17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Pmfbp1Q9WVQ0 1022 aa17.2■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Zkscan16A2ALW2 728 aa17.19■□□□□ 0.34
Ssr1-204ENSMUST00000225319 AU015836B2RUM3 263 aa17.19■□□□□ 0.34
Ssr1-204ENSMUST00000225319 TsksO54887 585 aa17.19■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Rdm1Q9CQK3 281 aa17.19■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Plekho1Q9JIY0 408 aa17.19■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Bin2D3Z6Q9 489 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Ms4a2P20490 235 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Ift57Q8BXG3 429 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Npc1l1Q6T3U4 1333 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Znfx1Q8R151 1909 aaKnown RBP17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Pde4bB1AWC9 736 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Pde8bE9Q4S1 865 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Atp2b3Q0VF55 1220 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Vps54Q5SPW0 977 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Pim2Q62070 370 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Ddx11Q6AXC6 880 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Sugp2Q8CH09 1067 aa17.18■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Ube4aE9Q735 1028 aa17.17■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Anxa1P10107 346 aaKnown RBP17.17■□□□□ 0.34
Ssr1-204ENSMUST00000225319 DekQ7TNV0 380 aaKnown RBP17.17■□□□□ 0.34
Ssr1-204ENSMUST00000225319 AnlnQ8K298 1121 aaKnown RBP17.17■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Top1mtQ8R4U6 593 aa17.17■□□□□ 0.34
Ssr1-204ENSMUST00000225319 LlphQ9D945 130 aaKnown RBP17.17■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Myh7Q91Z83 1935 aa17.17■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Ipo4Q8VI75 1082 aa17.16■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Dmrtc1Q9D9R7 182 aa17.16■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Myo3bQ1EG27 1305 aa17.15■□□□□ 0.34
Ssr1-204ENSMUST00000225319 Sept1P42209 366 aa17.15■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms