RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Nckap5lQ6GQX2 1323 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Col15a1O35206 1367 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 EzrP26040 586 aaKnown RBP7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Scp2P32020 547 aaKnown RBP7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 EvcP57680 1005 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Card10P58660 1021 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Wdhd1P59328 1117 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ccdc162pQ0VG85 912 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Taf5lQ91WQ5 589 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 PdcQ9QW08 244 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Becn1O88597 448 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ube2hP62257 183 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Tbc1d31Q6NXY1 996 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 Pip4k2bQ80XI4 416 aa7.42□□□□□ -1.22
Lig4-202ENSMUST00000170033 AtrnQ9WU60 1428 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Zfp142G5E869 1843 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Grm8P47743 908 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ppp4r3aQ6P2K6 820 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Sgsm2Q80U12 1005 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Frmd4bQ920B0 1035 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gtpbp4Q99ME9 634 aaKnown RBP7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ank1Q02357 1862 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 U2af2P26369 475 aaKnown RBP7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Gimap8Q75N62 688 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ppm1eQ80TL0 749 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ttc27Q8CD92 847 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Bmp2kQ91Z96 1138 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 NaspQ99MD9 773 aaKnown RBP7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Igbp1bQ9QZ29 343 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Plekhd1B2RPU2 505 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Nlrp1aQ2LKU9 1182 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ppm1mQ8BU27 406 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Serpina10Q8R121 448 aa7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ppil4Q9CXG3 492 aaKnown RBP7.41□□□□□ -1.22
Lig4-202ENSMUST00000170033 Kat6bQ8BRB7 1872 aa7.4□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ubn2Q80WC1 1314 aa7.4□□□□□ -1.22
Lig4-202ENSMUST00000170033 Lrp6O88572 1613 aa7.4□□□□□ -1.22
Lig4-202ENSMUST00000170033 Pde6bP23440 856 aa7.4□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ice2Q3UZ18 988 aaKnown RBP7.4□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ddx58Q6Q899 926 aa7.4□□□□□ -1.22
Lig4-202ENSMUST00000170033 Ferd3lQ923Z4 168 aa7.4□□□□□ -1.22
Lig4-202ENSMUST00000170033 Elmsan1E9Q2I4 1089 aaKnown RBP7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 Rnf216P58283 853 aa7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 Ankle2Q6P1H6 964 aa7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 Rps6ka5Q8C050 863 aa7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 4930572O03RikQ8C5Y0 211 aa7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 Atf7Q8R0S1 413 aa7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 Phkg2Q9DB30 406 aa7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 TefQ9JLC6 301 aa7.4□□□□□ -1.23
Lig4-202ENSMUST00000170033 Larp1bA0A0A6YXJ7 370 aaKnown RBP7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Syt1P46096 421 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Gjb2Q00977 226 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Fam228bQ497Q6 232 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Rgl2Q61193 778 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Ifit2Q64112 472 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 SympkQ80X82 1284 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 ThemisQ8BGW0 636 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Q9D9S1 216 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Stx6Q9JKK1 255 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Lcmt1A0A0U1RNF2 332 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Zfp651E9PZ11 729 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 TrdnE9Q9K5 693 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Cfdp1O88271 295 aaKnown RBP7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Map3k2Q61083 619 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Anp32cQ64G17 123 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 AbraQ8BUZ1 375 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Slc35g1Q8BY79 368 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 ZgpatQ8VDM1 511 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Smc3Q9CW03 1217 aaKnown RBP7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Dnajc10Q9DC23 793 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Wdr19Q3UGF1 1341 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Kdm3aQ6PCM1 1323 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Kndc1Q0KK55 1742 aa7.39□□□□□ -1.23
Lig4-202ENSMUST00000170033 Cspp1B2RX88 1205 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Trim30cD3YVI9 513 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Nlrp9bQ66X22 1003 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Tmem132eQ6IEE6 982 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Rasa4Q6PFQ7 802 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Znf771Q8BJ90 317 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Jakmip1Q8BVL9 626 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Trim52Q8CDV4 233 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Amotl2Q8K371 772 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Zbtb3Q91X45 518 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Ehd4Q9EQP2 541 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Pibf1E9Q6K3 756 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Snap23O09044 210 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Zap70P43404 618 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Mphosph10Q810V0 681 aaKnown RBP7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Brf1Q8CFK2 676 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Eif3bQ8JZQ9 803 aaKnown RBP7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Cep57l1Q8VDS7 400 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Rbm42Q91V81 474 aaKnown RBP7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Pdzd9Q9D9M4 266 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 InsrrQ9WTL4 1300 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Eef2kO08796 724 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Tti2Q8BGV4 512 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Chmp7Q8R1T1 451 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Farp2Q91VS8 1065 aa7.38□□□□□ -1.23
Lig4-202ENSMUST00000170033 Cfap44E9Q5M6 1843 aa7.37□□□□□ -1.23
Lig4-202ENSMUST00000170033 Dhx8A2A4P0 1244 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms