RNA–Protein interactions for RNA: ENSMUST00000120363.1

Hoxa1-202, Transcript of Homeobox protein Hox-A1, mousemouse

TSL 1 (best) BASIC

Gene Hoxa1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1-202ENSMUST00000120363 Crb1Q8VHS2 1405 aa21.41■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Eya2O08575 532 aa21.41■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Gm12185Q5NCB2 835 aa21.41■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Rcan3Q9JKK0 239 aa21.41■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Nap1l3Q794H2 544 aa21.4■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Ppp1r10Q80W00 888 aaKnown RBP21.4■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Dhx38Q80X98 1228 aa21.4■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Zfp113Q8C689 439 aa21.4■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 PdcQ9QW08 244 aa21.4■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Pde3aQ9Z0X4 1141 aa21.4■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Dnajc5P60904 198 aa21.39■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Paxip1Q6NZQ4 1056 aa21.39■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Krt25Q8VCW2 446 aa21.39■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Mrpl50Q8VDT9 159 aaKnown RBP21.39■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Shank3Q4ACU6 1730 aa21.39■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Sipa1l3G3X9J0 1776 aa21.39■■□□□ 1.02
Hoxa1-202ENSMUST00000120363 Leo1Q5XJE5 667 aa21.39■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Pip4k2bQ80XI4 416 aa21.39■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Ltb4r2Q9JJL9 360 aa21.39■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Usp48Q3V0C5 1052 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Vps54Q5SPW0 977 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Kank4Q6P9J5 1016 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Usp44Q8C2S0 711 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Rrp9Q91WM3 475 aaKnown RBP21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Ppp4r3bQ922R5 820 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Zeb2Q9R0G7 1215 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Nol12Q8BG17 217 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Erich6bQ9D4S6 220 aa21.38■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Brwd3A2AHJ4 1799 aa21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Klhl34A2AI76 644 aa21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Hap1O35668 628 aa21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Stat1P42225 749 aa21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 ZyxQ62523 564 aa21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Mb21d2Q8C525 428 aa21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Nup88Q8CEC0 753 aaKnown RBP21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Nav1Q8CH77 1875 aa21.37■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Irgm2A0A140LIF8 407 aa21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 F2rP30558 430 aa21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 R3hcc1Q8BSI6 488 aa21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Rrs1Q9CYH6 365 aaKnown RBP21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Marf1Q8BJ34 1730 aaKnown RBP21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Dhx16G3X8X0 1044 aaKnown RBP21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Ddx46Q569Z5 1032 aaKnown RBP21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Nol10Q5RJG1 687 aaKnown RBP21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Smg7Q5RJH6 1138 aaKnown RBP21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Asap2Q7SIG6 958 aa21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Zscan22Q8BGS5 496 aa21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Chmp3Q9CQ10 224 aa21.36■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Kcnh4A2A5F7 1018 aa21.35■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Jarid2Q62315 1234 aa21.35■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Lrrfip2Q91WK0 415 aa21.35■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 LratQ9JI60 231 aa21.35■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Arap2Q8BZ05 1703 aa21.35■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 TrdnE9Q9K5 693 aa21.34■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 DpydQ8CHR6 1025 aa21.34■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Ush1cQ9ES64 910 aa21.34■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Zscan25B2RX31 543 aa21.34■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Plcb3P51432 1234 aaKnown RBP21.34■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Mad1l1Q9WTX8 717 aaKnown RBP21.34■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Col4a1P02463 1669 aa21.34■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Ccdc66Q6NS45 935 aa21.33■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Ankib1Q6ZPS6 1085 aa21.33■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Gigyf1Q99MR1 1044 aaKnown RBP21.33■■□□□ 1.01
Hoxa1-202ENSMUST00000120363 Esyt1Q3U7R1 1092 aaKnown RBP21.33■■□□□ 1
Hoxa1-202ENSMUST00000120363 Golim4Q8BXA1 655 aa21.33■■□□□ 1
Hoxa1-202ENSMUST00000120363 Zfp51Q3U4L8 781 aa21.32■■□□□ 1
Hoxa1-202ENSMUST00000120363 Ccnl1Q52KE7 532 aaKnown RBP21.32■■□□□ 1
Hoxa1-202ENSMUST00000120363 ZwintQ9CQU5 252 aa21.32■■□□□ 1
Hoxa1-202ENSMUST00000120363 Casz1Q9CWL2 1761 aa21.32■■□□□ 1
Hoxa1-202ENSMUST00000120363 Becn1O88597 448 aa21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Pde4dQ01063 747 aa21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Rnf214Q8BFU3 668 aaKnown RBP21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Samm50Q8BGH2 469 aa21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Lrp6O88572 1613 aa21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Wdr33Q8K4P0 1330 aaKnown RBP21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Atp8a2P98200 1148 aa21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Ptcd1Q8C2E4 695 aaKnown RBP21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Iffo2Q8R2V2 512 aa21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 BrapQ99MP8 591 aa21.31■■□□□ 1
Hoxa1-202ENSMUST00000120363 Ttc19Q8CC21 365 aa21.3■■□□□ 1
Hoxa1-202ENSMUST00000120363 Ccdc158Q8CDI6 1109 aa21.3■■□□□ 1
Hoxa1-202ENSMUST00000120363 Wdr24Q8CFJ9 790 aa21.3■■□□□ 1
Hoxa1-202ENSMUST00000120363 ApobrQ8VBT6 942 aa21.3■■□□□ 1
Hoxa1-202ENSMUST00000120363 Srgap1Q91Z69 1062 aa21.3■■□□□ 1
Hoxa1-202ENSMUST00000120363 Krt85Q9Z2T6 507 aa21.3■■□□□ 1
Hoxa1-202ENSMUST00000120363 Timm10P62073 90 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 Tceanc2Q8R2M0 207 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 Sh3bp5Q9Z131 463 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 Ccdc162pQ0VG85 912 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 Limch1Q3UH68 1057 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 AidaQ8C4Q6 305 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 Tsr2Q8C8T8 191 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 Acsbg1Q99PU5 721 aa21.29■■□□□ 1
Hoxa1-202ENSMUST00000120363 Pcmtd1P59913 357 aa21.28■■□□□ 1
Hoxa1-202ENSMUST00000120363 Gm21985Q6P6P5 1106 aa21.28■■□□□ 1
Hoxa1-202ENSMUST00000120363 Rassf8Q8CJ96 419 aa21.28■■□□□ 1
Hoxa1-202ENSMUST00000120363 Plcd1Q8R3B1 756 aa21.28■■□□□ 1
Hoxa1-202ENSMUST00000120363 Chd1lQ9CXF7 900 aa21.28■■□□□ 1
Hoxa1-202ENSMUST00000120363 Cd22P35329 862 aa21.28■■□□□ 1
Hoxa1-202ENSMUST00000120363 Ccdc129Q14B48 1034 aa21.28■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms