RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ftl2P49945 183 aa19.09■□□□□ 0.65
Trim39-203ENSMUST00000113706 Gtf3c3Q3TMP1 882 aa19.08■□□□□ 0.65
Trim39-203ENSMUST00000113706 Utp18Q5SSI6 552 aaKnown RBP19.08■□□□□ 0.65
Trim39-203ENSMUST00000113706 Ccdc7Q9D541 371 aa19.08■□□□□ 0.65
Trim39-203ENSMUST00000113706 Rbm8a2A0A0N4SUH6 174 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Anxa1P10107 346 aaKnown RBP19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Gpr182P43142 395 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 ZyxQ62523 564 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Asap2Q7SIG6 958 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Rbm8aQ9CWZ3 174 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Ak2Q9WTP6 239 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Nphp3Q7TNH6 1325 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Cyp7a1Q64505 503 aa19.08■□□□□ 0.64
Trim39-203ENSMUST00000113706 Slc4a1P04919 929 aa19.07■□□□□ 0.64
Trim39-203ENSMUST00000113706 Gjb2Q00977 226 aa19.07■□□□□ 0.64
Trim39-203ENSMUST00000113706 DekQ7TNV0 380 aaKnown RBP19.07■□□□□ 0.64
Trim39-203ENSMUST00000113706 Fam84aQ9D650 292 aa19.07■□□□□ 0.64
Trim39-203ENSMUST00000113706 Lrp5Q91VN0 1614 aa19.07■□□□□ 0.64
Trim39-203ENSMUST00000113706 MecomP14404 1042 aa19.07■□□□□ 0.64
Trim39-203ENSMUST00000113706 Il4rP16382 810 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Trip6Q9Z1Y4 480 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Filip1lQ6P6L0 1131 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Nyap1Q6PFX7 833 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Susd4Q8BH32 490 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Golim4Q8BXA1 655 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 KinQ8K339 391 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Krt25Q8VCW2 446 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Smarce1O54941 411 aaKnown RBP19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 NpeppsQ11011 920 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Ints3Q7TPD0 1041 aaKnown RBP19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Tmem266Q8BZB3 538 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Trim34aQ99PP6 485 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 4933402E13RikQ9D4D2 429 aa19.06■□□□□ 0.64
Trim39-203ENSMUST00000113706 Kdm3aQ6PCM1 1323 aa19.05■□□□□ 0.64
Trim39-203ENSMUST00000113706 Zkscan8Q8BSL0 588 aa19.05■□□□□ 0.64
Trim39-203ENSMUST00000113706 Bmp2kQ91Z96 1138 aa19.05■□□□□ 0.64
Trim39-203ENSMUST00000113706 C4bP01029 1738 aa19.05■□□□□ 0.64
Trim39-203ENSMUST00000113706 Prr29B1ARI9 187 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Trim34bJ3QNR8 485 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Atp8a2P98200 1148 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Mctp2Q5RJH2 878 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Ugt1a5B2RT14 529 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Dctn1O08788 1281 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Ifit1bl2Q3U687 466 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Itga6Q61739 1091 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 StrbpQ91WM1 672 aaKnown RBP19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Mybbp1aQ7TPV4 1344 aaKnown RBP19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Smarcc1P97496 1104 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Dmrt2Q8BG36 561 aa19.04■□□□□ 0.64
Trim39-203ENSMUST00000113706 Kcnb2A6H8H5 907 aa19.03■□□□□ 0.64
Trim39-203ENSMUST00000113706 Rab3gap1Q80UJ7 981 aa19.03■□□□□ 0.64
Trim39-203ENSMUST00000113706 Plch1Q4KWH5 1682 aa19.03■□□□□ 0.64
Trim39-203ENSMUST00000113706 Sgsm2Q80U12 1005 aa19.03■□□□□ 0.64
Trim39-203ENSMUST00000113706 PhaxQ9JJT9 385 aaKnown RBP19.03■□□□□ 0.64
Trim39-203ENSMUST00000113706 Gm45015A0A140LII9 184 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Gm18336A0A140LIU8 765 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Elmsan1E9Q2I4 1089 aaKnown RBP19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Atp6v1dP57746 247 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Tti2Q8BGV4 512 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Nek11Q8C0Q4 628 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Pus3Q9JI38 481 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Cyp2c23E9Q5K4 494 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Tmx3Q8BXZ1 456 aa19.02■□□□□ 0.64
Trim39-203ENSMUST00000113706 Ltv1Q6NSQ7 470 aaKnown RBP19.02■□□□□ 0.63
Trim39-203ENSMUST00000113706 Cdca7lQ922M5 438 aa19.02■□□□□ 0.63
Trim39-203ENSMUST00000113706 Ccne2Q9Z238 404 aa19.02■□□□□ 0.63
Trim39-203ENSMUST00000113706 4931408C20RikE9PWP9 1381 aa19.02■□□□□ 0.63
Trim39-203ENSMUST00000113706 SowahdQ8BY98 327 aa19.01■□□□□ 0.63
Trim39-203ENSMUST00000113706 Mb21d2Q8C525 428 aa19.01■□□□□ 0.63
Trim39-203ENSMUST00000113706 Rdm1Q9CQK3 281 aa19.01■□□□□ 0.63
Trim39-203ENSMUST00000113706 Rufy3Q9D394 469 aa19.01■□□□□ 0.63
Trim39-203ENSMUST00000113706 TsksO54887 585 aa19.01■□□□□ 0.63
Trim39-203ENSMUST00000113706 Snai1Q02085 264 aa19.01■□□□□ 0.63
Trim39-203ENSMUST00000113706 TnksQ6PFX9 1320 aa19.01■□□□□ 0.63
Trim39-203ENSMUST00000113706 Dnttip2Q8R2M2 758 aaKnown RBP19■□□□□ 0.63
Trim39-203ENSMUST00000113706 NgdnQ9DB96 315 aaKnown RBP19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Gm13023A2A8N2 498 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Cyp2d10P24456 504 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Atp2b3Q0VF55 1220 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Slc38a10Q5I012 1090 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Q8BT18 775 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Polr3dQ91WD1 398 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Ppil4Q9CXG3 492 aaKnown RBP19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Npc1l1Q6T3U4 1333 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Cfap44E9Q5M6 1843 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Bin2D3Z6Q9 489 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 Ppfibp2O35711 882 aa19■□□□□ 0.63
Trim39-203ENSMUST00000113706 RubcnlQ3TD16 648 aa18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 Isy1Q69ZQ2 285 aaKnown RBP18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 Kiaa0319lQ8K135 1048 aa18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 Pof1bQ8K4L4 587 aa18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 4930523C07RikE9Q2T4 99 aa18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 F2rP30558 430 aa18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 Ddx19aQ61655 478 aaKnown RBP18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 Taok3Q8BYC6 898 aa18.99■□□□□ 0.63
Trim39-203ENSMUST00000113706 Lrit1Q8K099 624 aa18.98■□□□□ 0.63
Trim39-203ENSMUST00000113706 Atf7Q8R0S1 413 aa18.98■□□□□ 0.63
Trim39-203ENSMUST00000113706 PtmsQ9D0J8 101 aaKnown RBP18.98■□□□□ 0.63
Trim39-203ENSMUST00000113706 Q9D9S1 216 aa18.98■□□□□ 0.63
Trim39-203ENSMUST00000113706 Erc1Q99MI1 1120 aa18.98■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms